Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1191 ATGTATGACCTCGTTGTTATCCGTTGGATCATATTCGATGATCGCCATTTTAAGGCAGGTCAACAAGTGGGGCGCACGGAACCAGGTGAGAAATCGGAAGTTCAGAACGAAGCAGCAAAACCCAATCGAAACCGTTCTGGCTCTGAGTCACCGCGCTCTGCAACTTCACGGGGTTGGAGAACTAAGGTACTCACCCTGGCTGTCATTAGTTGTATATCGGTGGCGGAGGAAGGGCAGGTAAATGCCCCGCTTCTGTGGTCACGGGCACAAGAGCGAACTTCCATGACCATGCCTGACTTTGAGGGTAACCCGCAGAAGCTGTGCGATGATGGAGCCGCTGATGTTGAAATGCCCGGCACCGCTCACCAGATTAGCAGAGATTCTTGGTTTCAAGTGGGTTTTGTTCTCACCACCGGGATCAACAGCGCATATGTACTTGGATACTCTGGTACCATCATGGTCCCCCTTGGTTGGATATATGGTGTGCTTGGTTTGATTGCTGCTACCGCAATATCATTGTATGCAAATTCCCTTATTGCCAAGCTCCATGAGTTTGGAGGGAAGAGGCATATAAGGTACAGGGATCTTGCTGGATACATATACGGTAGGAAGGCATATTCTCTTACATGGGCGCTGCAGTATGTCAATCTTTTCATGATAAATACTGGCTATATCATTTTGGCTGGTTCAGCACTAAAGGCCGTTTATGTTCTGTTTAGGGATGATCATCAAATGAAGCTTCCATATTTTATTGCCATAGCTGGATTCGTGTGTGCAATGTTTGCTGTATGCATTCCCCATCTTTCAGCTCTTAGAGTTTGGTTGGGATTTTCAACAGTCTTCAGCCTAATATATATTGCAACAGCTTTTGCGTTGTCGCTTAAAGATGGCTTGAAATCACCAGCTCGAGATTATAGCATCCCCGGATCAACAACAAGTAAAATATTTACAACAATTGGAGCGTCTGCTAATCTTGTGTTTGCATATAATACAGGAATGCTTCCCGAGATACAGGCAACTATCAGGCAGCCGGTAGTCAAGCACATGATGAAGGCCCTATATTTCCAATTTACTGTTGGAGTTGCACCTCTTTATTTGGTTACGTTTACAGGGTACTGGGCTTATGGTTCTTCCACATCGTCCTATTTGCTGAGTAATGTGAATGGTCCAGTCTGGTTGAAAGCCACGGCCAACATTGCTACCTTTTTGCAGTCAGTCATCGCATTGCATATATTTGCAAGTCCAATGTATGAGTATTTGGATACTAGATATGGGATCACAGGAAGTGCGTTGGCTCCGAAGAACTTGTCGTTTCGAGTTCTGGTAAGGGGTGGCTACCTGACCTTCAATACATTTGTGTCTGCTCTCCTGCCTTTCCTTGGAGATTTCATGAGCCTCACTGGAGCTATAAGCACATTCCCTCTGACATTTATACTGGGGAATCATATGTATTTAGTGGCAAAGAAGAACAAACTAACGTCCTTACAAAAGCTCTGGCACTGGCTCAATGTTTGTTTCTTTGGCATCATGTCTGTTGCTGCTGCAATTGCAGCATTAAGGCTCATTGCTGTTGATTCCAAAACATACAATCTCTTTGCTGATTTATGA 1608 0.449 MYDLVVIRWIIFDDRHFKAGQQVGRTEPGEKSEVQNEAAKPNRNRSGSESPRSATSRGWRTKVLTLAVISCISVAEEGQVNAPLLWSRAQERTSMTMPDFEGNPQKLCDDGAADVEMPGTAHQISRDSWFQVGFVLTTGINSAYVLGYSGTIMVPLGWIYGVLGLIAATAISLYANSLIAKLHEFGGKRHIRYRDLAGYIYGRKAYSLTWALQYVNLFMINTGYIILAGSALKAVYVLFRDDHQMKLPYFIAIAGFVCAMFAVCIPHLSALRVWLGFSTVFSLIYIATAFALSLKDGLKSPARDYSIPGSTTSKIFTTIGASANLVFAYNTGMLPEIQATIRQPVVKHMMKALYFQFTVGVAPLYLVTFTGYWAYGSSTSSYLLSNVNGPVWLKATANIATFLQSVIALHIFASPMYEYLDTRYGITGSALAPKNLSFRVLVRGGYLTFNTFVSALLPFLGDFMSLTGAISTFPLTFILGNHMYLVAKKNKLTSLQKLWHWLNVCFFGIMSVAAAIAALRLIAVDSKTYNLFADL 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1191 535 Pfam Transmembrane amino acid transporter protein 126 518 IPR013057 -
Lele25g1191 535 MobiDBLite consensus disorder prediction 22 56 - -
Lele25g1191 535 PANTHER OS05G0424000 PROTEIN-RELATED 126 517 - -
Lele25g1191 535 MobiDBLite consensus disorder prediction 39 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1191 Lele-ChrLele25 7843674 7846567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1191 153 535 Organic Solute Cotransporters AT2G39890 75.979 0.0 613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1191 25 7843674 7846567 Lele25g1191 25 7843674 7846567 CCT
Lele25g1191 25 7843674 7846567 Lele26g1199 26 7796049 7799656 CCT
Lele25g1191 25 7843674 7846567 Lele27g0886 27 16865156 16867547 CCT
Lele25g1191 25 7843674 7846567 Lele28g1191 28 7765905 7769049 CCT
Lele25g1185 25 7800085 7803831 Lele25g1191 25 7843674 7846567 CCT
Lele25g1191 25 7843674 7846567 Lele25g1191 25 7843674 7846567 ECH
Lele25g1191 25 7843674 7846567 Lele27g0886 27 16865156 16867547 hybridization
Lele25g1191 25 7843674 7846567 Lele28g1191 28 7765905 7769049 hybridization