Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele25g1190 | ATGGTGAAGGGACGCCAAGGAGAGCGAGTCAGACTCTATGTTCGAGGTTCAATCCTAGGATACAAGAGGTCCAAGTCAAACCAATACCCAAATACATCACTTATCCAGATTGAGGGAGTGAACTCCAAGGAAGAGGTTGCATGGTACTGTGGCAAGCGCATGGCATACATTTACAAGGCCAAGGTGAAGAAAAACGGAAGCCACTATCGCTGCATTTGGGGTAAGGTTACCCGGCCTCATGGTAACAGTGGTGTTGTACGTGCCAAATTTAAGTCAAATCTGCCACCCAAATCAATGGGAGCAAAGGTAAGAGTCTTCATGTATCCAAGCAATATTTGA | 339 | 0.4602 | MVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIEGVNSKEEVAWYCGKRMAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGAKVRVFMYPSNI | 112 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele25g1190 | 112 | SUPERFAMILY | Translation proteins | 12 | 106 | IPR009000 | - | |
Lele25g1190 | 112 | Hamap | 50S ribosomal protein L35Ae [rpl35ae]. | 14 | 106 | IPR001780 | GO:0003735|GO:0005840|GO:0006412 | |
Lele25g1190 | 112 | ProSitePatterns | Ribosomal protein L35Ae signature. | 74 | 95 | IPR018266 | GO:0003735|GO:0005840|GO:0006412 | |
Lele25g1190 | 112 | FunFam | 60S ribosomal protein L35a | 7 | 112 | - | - | |
Lele25g1190 | 112 | PANTHER | 60S RIBOSOMAL PROTEIN L35A | 2 | 112 | IPR001780 | GO:0003735|GO:0005840|GO:0006412 | |
Lele25g1190 | 112 | Gene3D | translation elongation factor selb, chain A, domain 4 | 6 | 112 | IPR038661 | - | |
Lele25g1190 | 112 | Pfam | Ribosomal protein L35Ae | 12 | 106 | IPR001780 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele25g1190 | Lele-ChrLele25 | 7839753 | 7841052 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele25g1190 | 1 | 112 | Cytoplasmic Ribosomal Protein Gene Family | AT1G74270 | 91.071 | 2.99e-74 | 214 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele25g1190 | 25 | 7839753 | 7841052 | Lele25g1198 | 25 | 7927298 | 7929706 | CCT | |
Lele25g1190 | 25 | 7839753 | 7841052 | Lele26g1205 | 26 | 7882069 | 7884434 | CCT | |
Lele25g1190 | 25 | 7839753 | 7841052 | Lele27g0880 | 27 | 16794877 | 16797288 | CCT | |
Lele25g1190 | 25 | 7839753 | 7841052 | Lele28g1197 | 28 | 7840679 | 7843305 | CCT | |
Lele25g1190 | 25 | 7839753 | 7841052 | Lele27g0887 | 27 | 16871049 | 16872485 | hybridization | |
Lele25g1190 | 25 | 7839753 | 7841052 | Lele28g1189 | 28 | 7762402 | 7764038 | hybridization |