Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1190 ATGGTGAAGGGACGCCAAGGAGAGCGAGTCAGACTCTATGTTCGAGGTTCAATCCTAGGATACAAGAGGTCCAAGTCAAACCAATACCCAAATACATCACTTATCCAGATTGAGGGAGTGAACTCCAAGGAAGAGGTTGCATGGTACTGTGGCAAGCGCATGGCATACATTTACAAGGCCAAGGTGAAGAAAAACGGAAGCCACTATCGCTGCATTTGGGGTAAGGTTACCCGGCCTCATGGTAACAGTGGTGTTGTACGTGCCAAATTTAAGTCAAATCTGCCACCCAAATCAATGGGAGCAAAGGTAAGAGTCTTCATGTATCCAAGCAATATTTGA 339 0.4602 MVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIEGVNSKEEVAWYCGKRMAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGAKVRVFMYPSNI 112
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1190 112 SUPERFAMILY Translation proteins 12 106 IPR009000 -
Lele25g1190 112 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lele25g1190 112 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
Lele25g1190 112 FunFam 60S ribosomal protein L35a 7 112 - -
Lele25g1190 112 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 112 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lele25g1190 112 Gene3D translation elongation factor selb, chain A, domain 4 6 112 IPR038661 -
Lele25g1190 112 Pfam Ribosomal protein L35Ae 12 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele25g1190 Lele-ChrLele25 7839753 7841052 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1190 1 112 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 91.071 2.99e-74 214
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1190 25 7839753 7841052 Lele25g1198 25 7927298 7929706 CCT
Lele25g1190 25 7839753 7841052 Lele26g1205 26 7882069 7884434 CCT
Lele25g1190 25 7839753 7841052 Lele27g0880 27 16794877 16797288 CCT
Lele25g1190 25 7839753 7841052 Lele28g1197 28 7840679 7843305 CCT
Lele25g1190 25 7839753 7841052 Lele27g0887 27 16871049 16872485 hybridization
Lele25g1190 25 7839753 7841052 Lele28g1189 28 7762402 7764038 hybridization