Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1189 ATGAACCTTCTTCTTTACATGGCTCCAATGGCAGTTGTTTTGCTTCTTCCAGCCACGCTTGTAATGGAAGAAAATGTGGTTGGTATCACACTAGCTCTTGCCAGAGATGATGTCAAGATCATCTGGTATCTGCTTTTTAACTCAGCACTTGCATATTTTGTCAACTTGACCAACTTTTTGGTCACAAAGCACACCAGTGCTCTTACCCTTCAGGTGATCTGGAGTATAGGGGCTGGGAGGCTTTTCCAGATCTTTCCAGCTGAAACCATGGTTCAATTAGTTAGTTCACTGGTACTCGGGAATGCTAAAGGGGCTGTGGCTGTAGTGGTTTCAATTCTTATATTTAGAAACCCAGTGTCTGTCACTGGAATGCTAGGTTACACGCTCACGGTCTTTGGAGTTATACTTTACAGTGAAGCCAAGAAGCGAAGCAAGACACAACAGTCTTAA 450 0.4356 MNLLLYMAPMAVVLLLPATLVMEENVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVIWSIGAGRLFQIFPAETMVQLVSSLVLGNAKGAVAVVVSILIFRNPVSVTGMLGYTLTVFGVILYSEAKKRSKTQQS 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1189 149 PANTHER SOLUTE CARRIER FAMILY 35 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1189 Lele-ChrLele25 7828932 7830659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1189 1 145 Organic Solute Cotransporters AT3G11320 75.172 5.14e-68 206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1189 25 7828932 7830659 Lele25g1189 25 7828932 7830659 CCT
Lele25g1189 25 7828932 7830659 Lele26g1196 26 7782278 7786532 CCT
Lele25g1189 25 7828932 7830659 Lele27g0888 27 16880523 16882225 CCT
Lele25g1189 25 7828932 7830659 Lele28g1188 28 7752864 7758577 CCT
Lele26g1184 26 7690216 7701508 Lele25g1189 25 7828932 7830659 CCT
Lele27g0898 27 16958221 16958888 Lele25g1189 25 7828932 7830659 CCT
Lele28g1177 28 7677047 7677707 Lele25g1189 25 7828932 7830659 CCT
Lele25g1189 25 7828932 7830659 Lele26g1196 26 7782278 7786532 ECH
Lele25g1189 25 7828932 7830659 Lele25g1189 25 7828932 7830659 ECH
Lele25g1189 25 7828932 7830659 Lele27g0888 27 16880523 16882225 ECH
Lele25g1189 25 7828932 7830659 Lele28g1188 28 7752864 7758577 ECH
Lele26g1196 26 7782278 7786532 Lele25g1189 25 7828932 7830659 ECH
Lele27g0888 27 16880523 16882225 Lele25g1189 25 7828932 7830659 ECH
Lele28g1188 28 7752864 7758577 Lele25g1189 25 7828932 7830659 ECH
Lele25g1189 25 7828932 7830659 Lele27g0888 27 16880523 16882225 hybridization
Lele25g1189 25 7828932 7830659 Lele28g1188 28 7752864 7758577 hybridization