Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1175 ATGGTGAAACCCACAAAGGCCGAGAAGAAGATCGCTTACGATGCCAAATTGTGCCAGCTTCTGGAGGAGTACACCCAGATCCTTGTGGTGGCGGCCGACAACGTCGGATCCAACCAGCTTCAGAACATCAGGAGGGGTCTGCGTGGTGACTCGGTGGTGCTCATGGGCAAGAACACCATGATGAAGCGCTCTGTTAGGATTCATGCTGAGAACACTGGCAACAATGCCTTCCTCAACCTTATCCCTCTGCTTCAGGGCAACGTGGGGCTAATTTTCACTAAAGGAGACCTGAAGGAGGTTAGCGAGGAGGTTGCCAAGTACAAGGTTGGAGCTCCTGCCCGTGTGGGTTTGGTTGCTCCCATTGATGTCGTTGTTCCTCCTGGCAACACAGGGCTGGATCCCTCTCAGACATCTTTCTTCCAGGTGCTCAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACCCCTGTGGAACTTATCAAGAAGGGTGACAAGGTCGGCTCCTCAGAAGCTGCTCTGCTTGCAAAACTTGGGATTAGGCCCTTCTCATATGGGCTCGTGGTCCTATCTGTGTATGATAACGGTTCAGTGTTTAGCCCTGAGGTTCTTGATCTTACTGAAGATGACCTTGTTGAGAAATTCGCTACTGGTGTGTCCATGGTGACATCACTTTCTTTGGCCGTCTCATACCCAACAATTGCAGCTGCACCCCACATGTTCATCAATGGCTACAAAAACGTGTTGGCTGTTTCACTGGACACTAATTACTCTTACCCTCAGGCTGAGAAGGTTAAGGAGTACCTAGAGGATCCCAGCAAGTTTGCCGTTGCTGCTGTTGCGGCTGCTCCTGTTGCTGATTCAGGTTCTGTCCCAGCTGCTGCTGCAGAGGAGAAGAAGGAGGAGCCAGCTGAAGAATCTGATGATGACATGGGCTTCAGCCTGTTTGATTAA 960 0.5062 MVKPTKAEKKIAYDAKLCQLLEEYTQILVVAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRSVRIHAENTGNNAFLNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLVEKFATGVSMVTSLSLAVSYPTIAAAPHMFINGYKNVLAVSLDTNYSYPQAEKVKEYLEDPSKFAVAAVAAAPVADSGSVPAAAAEEKKEEPAEESDDDMGFSLFD 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1175 319 MobiDBLite consensus disorder prediction 287 319 - -
Lele25g1175 319 Gene3D - 5 208 IPR043141 -
Lele25g1175 319 CDD Ribosomal_P0_L10e 8 184 - -
Lele25g1175 319 SUPERFAMILY Ribosomal protein L10-like 7 133 IPR043141 -
Lele25g1175 319 MobiDBLite consensus disorder prediction 304 319 - -
Lele25g1175 319 Pfam 60s Acidic ribosomal protein 233 318 - -
Lele25g1175 319 FunFam 60S acidic ribosomal protein P0 112 185 - -
Lele25g1175 319 Pfam Ribosomal protein L10 6 107 IPR001790 -
Lele25g1175 319 PIRSF L10E 1 319 IPR030670 GO:0042254
Lele25g1175 319 Gene3D - 113 184 IPR043164 -
Lele25g1175 319 Pfam Insertion domain in 60S ribosomal protein L10P 113 182 IPR040637 -
Lele25g1175 319 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1175 Lele-ChrLele25 7701032 7702941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1175 2 318 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 84.591 0.0 519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1175 25 7701032 7702941 Lele26g1176 26 7655894 7657806 ECH
Lele25g1175 25 7701032 7702941 Lele25g1175 25 7701032 7702941 ECH
Lele25g1175 25 7701032 7702941 Lele27g0904 27 17001922 17003838 hybridization
Lele25g1175 25 7701032 7702941 Lele28g1169 28 7636332 7638230 hybridization