Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1174 ATGAATCCGACGACTGAGCGTGATGAGAGAGAGGAAGGAGACAAGGGGGATGGCTCTGCTTTTACCTTCAAATCCTTTCTCTGGCATGGTGGCTCTGCTTATGATGCCTGGTTCAGCTGCGCCTCGAATCAGGTTGCCCAAGTTCTGTTGACTCTGCCGACTTCTTTCTCTCAACTGGGAATGCTTTCAGGCATCATATTCCAAATATTCTATGGTTTCCTTGGAAGCTGGACTGCTTATTTGATCAGCATTCTTTACATCGAGTACAGAAGCCGGAAAGAGAAAGAAAACGTCAGCTTCAAAAACCATGTCATTCAGTGGTTCGAAGTGTTGGATGGCTTACTGGGTCCATATTGGAAAGCTATCGGATTGGCTTTCAACTGTACTTTTCTCCTCTTCGGCTCTGTTATCCAGCTTATTGCCTGTGCAAGTAATATATACTTAATAAATGACAAGCTGGATAAGAGGACATGGACTTATATTTTTGGAGCTTGTTGTGCCACCACCGTTTTTGTACCATCCTTCCATAATTACCGGATATGGTCCTTCCTTGGCCTAGGCATGACCACTTTCACCGCTTGGTATTTAACCATCGCCGCCGCCGTAAACGGCCAGGTTGAGAATGTGACGCACTCGGCCCCCACCAAACTGGTTCTGTATTTCACAGGCGCCACCAATATACTGTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAGAAGTTCAAATACATATATCTCTTCGCCACAATTTATGTGTTCACCCTCACCATACCATCGGCGGCCACCGTGTACTGGGCCTTCGGAGACCAACTCCTCCATCAGTCCAATGCCTTGGCGCTCCTCCCTCGCTCCGGCTGGCGTGATCTCGCTGTCATTCTAATGCTCATTCACCAGTTCATAACATTTGGGTTTGCTTGTACGCCATTGTATTTTGTGTGGGAGAAAGTGATCGGAATGCATGACACAAAGAGCATATGCTTGAGGGCTCTTGCTAGGTTGCCTGTGGTGATACCAATATGGTTCTTAGCGATCATTTTCCCCTTCTTCGGCCCCATAAACTCCGCCGTGGGCGCTCTTCTTGTCAGCTTTACCGTCTACATCATCCCTGCCCTCGCCCATATGCTCACTTACAGGTCTTCCTCAGCACGTCAGAATGCAGCAGAGAAACTCCCAGGGTTCATACCGAATTGGACGGCGATGTACGTGGTGAATGCGTTGGTGGTGGCGTGGGTTTTGGTGGTAGGGTTTGGATTCGGTGGGTGGGCTAGCCTCACCAATTTCATCGACCAAGTTGGCACCTTCGGCCTATTTGCCAAGTGCTATCAGTGCCGTCCCAAGCCGGCTCCTCATTTCAATCACACAGCACTTCCTCATCCCTGA 1407 0.4925 MNPTTERDEREEGDKGDGSAFTFKSFLWHGGSAYDAWFSCASNQVAQVLLTLPTSFSQLGMLSGIIFQIFYGFLGSWTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYLINDKLDKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLGMTTFTAWYLTIAAAVNGQVENVTHSAPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATIYVFTLTIPSAATVYWAFGDQLLHQSNALALLPRSGWRDLAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRSSSARQNAAEKLPGFIPNWTAMYVVNALVVAWVLVVGFGFGGWASLTNFIDQVGTFGLFAKCYQCRPKPAPHFNHTALPHP 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1174 468 Pfam Transmembrane amino acid transporter protein 29 422 IPR013057 -
Lele25g1174 468 PANTHER OS05G0424000 PROTEIN-RELATED 35 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1174 Lele-ChrLele25 7663490 7666752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1174 15 463 Organic Solute Cotransporters AT2G21050 77.223 0.0 741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1176 26 7655894 7657806 Lele25g1174 25 7663490 7666752 CCT
Lele27g0904 27 17001922 17003838 Lele25g1174 25 7663490 7666752 CCT
Lele28g1169 28 7636332 7638230 Lele25g1174 25 7663490 7666752 CCT
Lele25g1174 25 7663490 7666752 Lele25g1174 25 7663490 7666752 CCT
Lele25g1174 25 7663490 7666752 Lele26g1175 26 7632645 7636402 CCT
Lele25g1174 25 7663490 7666752 Lele27g0906 27 17017612 17020825 CCT
Lele25g1174 25 7663490 7666752 Lele28g1168 28 7618012 7621760 CCT
Lele26g1157 26 7490783 7494089 Lele25g1174 25 7663490 7666752 CCT
Lele27g0922 27 17148637 17153282 Lele25g1174 25 7663490 7666752 CCT
Lele28g1150 28 7482135 7485334 Lele25g1174 25 7663490 7666752 CCT
Lele25g1159 25 7521680 7524962 Lele25g1174 25 7663490 7666752 CCT
Lele25g1174 25 7663490 7666752 Lele25g1174 25 7663490 7666752 ECH
Lele25g1174 25 7663490 7666752 Lele26g1175 26 7632645 7636402 ECH
Lele25g1174 25 7663490 7666752 Lele27g0906 27 17017612 17020825 hybridization
Lele25g1174 25 7663490 7666752 Lele28g1168 28 7618012 7621760 hybridization