Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele25g1168 | ATGAATCAATGTACTGTCTATGTTTCTGTATGTATTCTGTTTTTGTATTGTACTCCATTTATGATATGGTATAAGTACAACAACCAATCATGTATTTGGTGGAGGTATAAATTACAGCAACTTGTATTTGCAGCTGCCATATATATAGCTGCTTTTAATTATCGGCATCATTTAAGGCGGTTCTTGAAAGTTAACAAATTTCATATAGTTGTTCTCTGGGTCGAGATTCAAGTCATGGGGAGGTTGTTTGCGGTCAATCTTGAGGGGAAGATCTATAGCTGCAAACACTGCCGTACCCATCTCGCTCTTGTTGAAGACATCGTGTCCAAGTCTTTCCACTGCAAACATGGGAAAGCTTATCTCTTCAATAAGGTAGTGAACGTTTCTGTTGGAGAAAAGGAGGAGAGAATGATGATGACTGGGCTGCATACTGTGGCTGACATTTTCTGTGTGGGTTGTGGATCAATTGTGGGGTGGAAATATGAGACTGCCTATGAAAAAAGCCAGAAGTACAAGGAAGGAAAGTCTGTTCTTGAACGGTACAAGGTGGCAGGTCCTGATGGAAGCAATTATTGGGTCAGTCATGATACACATGTTGGTGGAAGTGATGCAGATGATGCTTAA | 624 | 0.4054 | MNQCTVYVSVCILFLYCTPFMIWYKYNNQSCIWWRYKLQQLVFAAAIYIAAFNYRHHLRRFLKVNKFHIVVLWVEIQVMGRLFAVNLEGKIYSCKHCRTHLALVEDIVSKSFHCKHGKAYLFNKVVNVSVGEKEERMMMTGLHTVADIFCVGCGSIVGWKYETAYEKSQKYKEGKSVLERYKVAGPDGSNYWVSHDTHVGGSDADDA | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele25g1168 | 207 | Pfam | Yippee zinc-binding/DNA-binding /Mis18, centromere assembly | 91 | 183 | IPR004910 | - | |
| Lele25g1168 | 207 | PANTHER | PROTEIN YIPPEE-LIKE CG15309-RELATED | 79 | 184 | IPR039058 | - | |
| Lele25g1168 | 207 | ProSiteProfiles | Yippee domain profile. | 90 | 187 | IPR034751 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele25g1168 | Lele-ChrLele25 | 7616395 | 7620438 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele26g1168 | 26 | 7592121 | 7596988 | Lele25g1168 | 25 | 7616395 | 7620438 | CCT | |
| Lele27g0910 | 27 | 17058916 | 17062744 | Lele25g1168 | 25 | 7616395 | 7620438 | CCT | |
| Lele28g1161 | 28 | 7575684 | 7578720 | Lele25g1168 | 25 | 7616395 | 7620438 | CCT | |
| Lele25g1168 | 25 | 7616395 | 7620438 | Lele25g1168 | 25 | 7616395 | 7620438 | CCT | |
| Lele25g1168 | 25 | 7616395 | 7620438 | Lele26g1167 | 26 | 7586489 | 7590360 | CCT | |
| Lele25g1168 | 25 | 7616395 | 7620438 | Lele27g0911 | 27 | 17064114 | 17068142 | CCT | |
| Lele25g1168 | 25 | 7616395 | 7620438 | Lele28g1159 | 28 | 7563425 | 7567281 | CCT | |
| Lele25g1154 | 25 | 7459199 | 7465760 | Lele25g1168 | 25 | 7616395 | 7620438 | CCT | |
| Lele25g1168 | 25 | 7616395 | 7620438 | Lele25g1168 | 25 | 7616395 | 7620438 | ECH | |
| Lele25g1168 | 25 | 7616395 | 7620438 | Lele26g1167 | 26 | 7586489 | 7590360 | ECH | |
| Lele25g1168 | 25 | 7616395 | 7620438 | Lele27g0911 | 27 | 17064114 | 17068142 | hybridization | |
| Lele25g1168 | 25 | 7616395 | 7620438 | Lele28g1159 | 28 | 7563425 | 7567281 | hybridization |