Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1167 ATGGCTGCTTCCGCCACTTCATACTTCTTCGGCACTCGGCTTGCCATCAACAATCCCGCCTCTGACTCCGGCAGATTCCACGCCCTGCTTAAGTTCGGTACCAAGAAGAAGGCCGCCCCACCTCCCCCGCCCCCCAAAAAAGCGTCCAACACCAAACCATCAGGAGACCGGCTCGTGTGGTTCCCCGGTGCCAAACCACCGGAATGGCTCGACGGCACCATGGTTGGAGACCGTGGGTTCGATCCATTTGGCTTGGGTAAACCTGCAGAGTATTTGCAGTTCGACTTGGACTCGCTGGACCAGAATCTAGCTAAGAATGTGGCCGGAGAATTAATCGGAACCAGAGTGGAGACCACGGAGGTTAAACCAACGCCGTTCCAGCCGTACACGGAGGTGTTCGGGTTGCAGAGGTTCCGCGAGTGTGAGGTGATTCATGGAAGGTGGGCAATGCTTGGAGCACTCGGTGCCTTGGCCGTTGAGGCATTTACTGGAGTCTCATGGCAAGACGCTGGAAAGGTGGAGCTGGTGGAAGGGTCATCCTATCTGGGTCTTCCTCTTCCATTCTCATTGACCACACTGATCTGGATTGAGGTGATATTGATAGGCTACATTGAATTCCAAAGAAATGCAGAACTTGACCCAGAAAAGAGGATATACCCAGGTGGCAAGTTCTTCGATCCCCTCGGCTTAGCCAACGACCCCGAAGAGAAGGCCAGACTTCAACTTGCAGAGATCAAGCACTCCAGGTTAGCCATGGTGGTTTTCCTCACCTTTGCAATTCAAGCTGCTGTTACAGGCAAAGGTCCCATCGCTTTTATTGCTACCTTTAACAAGTGA 837 0.5317 MAASATSYFFGTRLAINNPASDSGRFHALLKFGTKKKAAPPPPPPKKASNTKPSGDRLVWFPGAKPPEWLDGTMVGDRGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGELIGTRVETTEVKPTPFQPYTEVFGLQRFRECEVIHGRWAMLGALGALAVEAFTGVSWQDAGKVELVEGSSYLGLPLPFSLTTLIWIEVILIGYIEFQRNAELDPEKRIYPGGKFFDPLGLANDPEEKARLQLAEIKHSRLAMVVFLTFAIQAAVTGKGPIAFIATFNK 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1167 278 Pfam Chlorophyll A-B binding protein 66 262 IPR022796 -
Lele25g1167 278 SUPERFAMILY Chlorophyll a-b binding protein 54 275 - -
Lele25g1167 278 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 31 274 IPR001344 GO:0009765|GO:0016020
Lele25g1167 278 MobiDBLite consensus disorder prediction 35 57 - -
Lele25g1167 278 Gene3D Chlorophyll a/b binding protein domain 59 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1167 Lele-ChrLele25 7614331 7616260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1167 9 275 Chloroplast and Mitochondria Gene Families AT3G08940 71.536 2.73e-136 384
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1167 25 7614331 7616260 Lele25g1167 25 7614331 7616260 ECH
Lele25g1167 25 7614331 7616260 Lele27g0912 27 17068277 17070594 hybridization
Lele25g1167 25 7614331 7616260 Lele28g1158 28 7561289 7563301 hybridization