Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1161 ATGAGCAAGTTTGATTCCTCCTCCGCCGTTACCGAATCTGCCATGGAAGACCCCTCCGGCCCCCGCCAAAACCTACCTAGGAAGGGACGCCACCGCCCCTCCCCGACCACCACCATCAGCACCACCACCACCGGGGACTCCGACGGAGAAGTGGAGGAAGCCGAACAGGGCGACCCAAAGGCGTGGGCGGCGTTTAACAAGAGCTTCCGGCAGGTACAATCGGTGTTGGATCGTAACCGCCTTCTGATTCAGCAGGTGAACGAGAACCACCAGTCTAGGATCCCCAACAATATGGTGAAGAACGTGTCCTTGATTCAGGAGCTCAACGGAAATATCTCCCAGGTCGTCTCTCTTTACTCTGATCTCAATTCTAATTTCTCCACCATTTGCCAGCAACACGCCGATGATCTTCACGGAAGATCTAAATTCTTAGGGTTTACACTTATCAATGTTGCGGTTCATAAGGTTGAAGATGGCAGAAATCCAACCTTATTTCAAGGCTTCAAGCCTCATGCCTCTGAGATCAGATCAGATATTATTGCGATTAGATTTTGTTGCAGACAGAATCATCGTGGATCGTACAATGTGAGGCTGTGA 597 0.5075 MSKFDSSSAVTESAMEDPSGPRQNLPRKGRHRPSPTTTISTTTTGDSDGEVEEAEQGDPKAWAAFNKSFRQVQSVLDRNRLLIQQVNENHQSRIPNNMVKNVSLIQELNGNISQVVSLYSDLNSNFSTICQQHADDLHGRSKFLGFTLINVAVHKVEDGRNPTLFQGFKPHASEIRSDIIAIRFCCRQNHRGSYNVRL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1161 198 Pfam Early Flowering 4 domain 57 134 IPR009741 -
Lele25g1161 198 MobiDBLite consensus disorder prediction 30 47 - -
Lele25g1161 198 MobiDBLite consensus disorder prediction 1 18 - -
Lele25g1161 198 MobiDBLite consensus disorder prediction 1 58 - -
Lele25g1161 198 PANTHER PROTEIN ELF4-LIKE 4 44 136 IPR040462 GO:0042753
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1161 Lele-ChrLele25 7535674 7536847 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1161 25 7535674 7536847 Lele25g1161 25 7535674 7536847 CCT
Lele25g1161 25 7535674 7536847 Lele28g1152 28 7495557 7495976 CCT
Lele26g1149 26 7395986 7397407 Lele25g1161 25 7535674 7536847 CCT
Lele27g0931 27 17255749 17257064 Lele25g1161 25 7535674 7536847 CCT
Lele28g1141 28 7394295 7395718 Lele25g1161 25 7535674 7536847 CCT
Lele25g1150 25 7417077 7428474 Lele25g1161 25 7535674 7536847 CCT
Lele25g1161 25 7535674 7536847 Lele28g1152 28 7495557 7495976 hybridization