Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1159 ATGTCACTAACTACTAACAACGATTCTCCTTTGAAGGAAGAAGAAGAGGAAGAGGAAGAGGAAGAGGGGATTGTTGAAAACATGAAGACCTATAACAAGTACAAGTGGCTCTTGTTCTTCACCAGAAAATACAAAAGCAACGATCTGGCTCCACCTCGGGACCTCAAAGAGGCCTTCTCCAACTTCGCCGGCGGTGGGGACCGCATGTCCGTCGACCAGTTCCTGCGTTTCCTGGGGGAGCATCAAGGCCACGTGGACTGTACCGTATCGGAATCGGAGGAAATTTTTGACAAGATCCTGAAAGCTCGAAAGGGAAGTCACGACGATGATCAGCGAACTGAACAACAACAACAACATGAACTCACTCTCGAAGACATCTTCCATTTTCTTCTTCTCGACGATTTCAACAGTCCTCTGAAATCTGAGGTTCATCATGATATGGAAGCTCCGTTGTCACACTATTTCATATACACAGGGCATAACTCATATCTTACTGGGAATCAATTGAGCAGTGATTGCAGTGAAAAACCGATCATTAAGGCTCTGCAACGAGGCGTGAGGGCCATCGAACTAGATTTATGGCCTACTTCCAACAAAGATGATATTAAAGTAGTTCATGGATGGACTCTTACCAATCCTGTTTCACCTCATAAATGTTTGGAGGCAATAAAGAATTATGCTTTTGTGAAATCTGAGTACCCAGTTATTATAACTATTGAAGACCACCTTACAAGAGATCTTCAAGCTAAATTTGCAGAGATGGCTACTCAAATACTAGGAGAATTGCTATATTATCCTCAGGGGAAACTTTTGACAGAATTCCCATCACCAAAATCATTGAAAAACAAAATAATTATATCCACCAAACCTCCAAAAGAACATCTCTGTGAATGCATTGAAGATAAAGGTAACAACCATGTGCAAGATGGAAGTGAATCATCTGAAGAAGAAACATCATGGGAACAAGAATCTACAGACTCCATGGCTGAAACAGAGGCAACTGAGAACAAAGTGGCTGAACCAGAAACTGAGAACAAGGTGAGTCAGAATGGAAGTGAGAAAGAAAAGGGAGATTCAAATGGAGGTGATGAACAACATAGGACAGATCAAAGGTGTTCAGCTGATTATAAACGGTTAATCACAATCCATGCGAAGAAACTCGAGGGTAGTTTAAACGATAAATTGAGGATTGAAGAGGAAGTTAGACGCCTAAGCTGGAATGAGCAGAAGCTTGAAAAGGCTTGTGAATCTCATGGAACTGATATTATAAGGTTCACACAGAGAAACATCCTCAGGGTATACCCAAAAGGAACACGTGTCCAATCCTCAAATTTCAAGCCCCATAAAGGGTGGATGTATGGAGCTCAAATGGTAGCATTCAATATGCAGAAGCATGGGAAGGAGCTGTGGCTGATGCAGGGAATGTTCAGGGCAAATGGAGGGTGTGGTTATGTGAAAAAACCAGAAATAGTAATGCAGAATCTTCCAAATGGAGAACTGTTTGATCCTAAAAGAACATTGCCAGTGAAAAAGACATTAAAGGTAAATGTGTACATGGGACATGGTTGGAGCTCAGATTTCAGTCCCACTCACTTTGACAAGTTCTCTCCACCAGATTTCTACACAAAGGTCAGTATTGTAGGAGTGCCAGCTGACTGTGCCAGGAAGAGCACAAGGGTAATAATGGACAATTGGTTTCCTGTTTGGGAAGAGGAATTCAAATTCCCATTAACAGTGCCAGAGCTGGCTTTGCTTAGGATAATAGTGAGGGAAAAAGACCAGGGAAAAGATGACTTTGGTGGTCAGACATGTTTGCCAATCTCAGAGTTAAGACTTGGATTTCGTTCAGTCCCTCTGTATAACAGAAAGGGAGAGAAATACAACTCTGTAAAGCTTTTCATGCGGTTTCAGTTCATTGACCAAGAAAATTTAGTTTCAGTCAAATGA 1947 0.4181 MSLTTNNDSPLKEEEEEEEEEEGIVENMKTYNKYKWLLFFTRKYKSNDLAPPRDLKEAFSNFAGGGDRMSVDQFLRFLGEHQGHVDCTVSESEEIFDKILKARKGSHDDDQRTEQQQQHELTLEDIFHFLLLDDFNSPLKSEVHHDMEAPLSHYFIYTGHNSYLTGNQLSSDCSEKPIIKALQRGVRAIELDLWPTSNKDDIKVVHGWTLTNPVSPHKCLEAIKNYAFVKSEYPVIITIEDHLTRDLQAKFAEMATQILGELLYYPQGKLLTEFPSPKSLKNKIIISTKPPKEHLCECIEDKGNNHVQDGSESSEEETSWEQESTDSMAETEATENKVAEPETENKVSQNGSEKEKGDSNGGDEQHRTDQRCSADYKRLITIHAKKLEGSLNDKLRIEEEVRRLSWNEQKLEKACESHGTDIIRFTQRNILRVYPKGTRVQSSNFKPHKGWMYGAQMVAFNMQKHGKELWLMQGMFRANGGCGYVKKPEIVMQNLPNGELFDPKRTLPVKKTLKVNVYMGHGWSSDFSPTHFDKFSPPDFYTKVSIVGVPADCARKSTRVIMDNWFPVWEEEFKFPLTVPELALLRIIVREKDQGKDDFGGQTCLPISELRLGFRSVPLYNRKGEKYNSVKLFMRFQFIDQENLVSVK 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1159 648 SUPERFAMILY PLC-like phosphodiesterases 145 493 IPR017946 GO:0006629|GO:0008081
Lele25g1159 648 SMART C2_3c 512 619 IPR000008 -
Lele25g1159 648 Pfam C2 domain 512 611 IPR000008 -
Lele25g1159 648 ProSiteProfiles C2 domain profile. 496 621 IPR000008 -
Lele25g1159 648 CDD C2_PLC_like 510 638 - -
Lele25g1159 648 SMART plcx_3 145 289 IPR000909 -
Lele25g1159 648 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 145 289 - -
Lele25g1159 648 MobiDBLite consensus disorder prediction 1 24 - -
Lele25g1159 648 Gene3D Phosphatidylinositol (PI) phosphodiesterase 141 504 IPR017946 GO:0006629|GO:0008081
Lele25g1159 648 FunFam Phosphoinositide phospholipase C 507 639 - -
Lele25g1159 648 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 401 489 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele25g1159 648 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 512 639 IPR035892 -
Lele25g1159 648 MobiDBLite consensus disorder prediction 333 371 - -
Lele25g1159 648 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 38 638 IPR001192 GO:0035556
Lele25g1159 648 SMART plcy_3 376 492 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele25g1159 648 PRINTS Phospholipase C signature 273 290 IPR001192 GO:0035556
Lele25g1159 648 PRINTS Phospholipase C signature 176 196 IPR001192 GO:0035556
Lele25g1159 648 PRINTS Phospholipase C signature 451 469 IPR001192 GO:0035556
Lele25g1159 648 PRINTS Phospholipase C signature 150 168 IPR001192 GO:0035556
Lele25g1159 648 PRINTS Phospholipase C signature 430 451 IPR001192 GO:0035556
Lele25g1159 648 PRINTS Phospholipase C signature 605 615 IPR001192 GO:0035556
Lele25g1159 648 MobiDBLite consensus disorder prediction 303 371 - -
Lele25g1159 648 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 405 491 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele25g1159 648 Gene3D - 47 140 - -
Lele25g1159 648 Gene3D C2 domain 507 647 IPR035892 -
Lele25g1159 648 SUPERFAMILY EF-hand 39 147 IPR011992 -
Lele25g1159 648 Pfam Phosphatidylinositol-specific phospholipase C, X domain 147 289 IPR000909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1159 Lele-ChrLele25 7521680 7524962 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1159 17 638 Acyl Lipid Metabolism Gene Families AT2G40116 53.966 0.0 673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1158 26 7510919 7513554 Lele25g1159 25 7521680 7524962 CCT
Lele27g0920 27 17133338 17136688 Lele25g1159 25 7521680 7524962 CCT
Lele28g1151 28 7487404 7493158 Lele25g1159 25 7521680 7524962 CCT
Lele25g1159 25 7521680 7524962 Lele25g1159 25 7521680 7524962 CCT
Lele25g1159 25 7521680 7524962 Lele27g0921 27 17141992 17145253 CCT
Lele25g1149 25 7411628 7413032 Lele25g1159 25 7521680 7524962 CCT
Lele25g1159 25 7521680 7524962 Lele25g1174 25 7663490 7666752 CCT
Lele25g1159 25 7521680 7524962 Lele26g1175 26 7632645 7636402 CCT
Lele25g1159 25 7521680 7524962 Lele27g0906 27 17017612 17020825 CCT
Lele25g1159 25 7521680 7524962 Lele28g1168 28 7618012 7621760 CCT
Lele25g1159 25 7521680 7524962 Lele25g1159 25 7521680 7524962 ECH
Lele25g1159 25 7521680 7524962 Lele27g0921 27 17141992 17145253 hybridization