Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1158 ATGGGAACCTACCATTACAAAATATTCAATTGCTTCAACCTTAAGTTCACTGTCTCGGAGCCGGGCCCACCAGAGGAAGTCAAGTACGTCTTTTACAAGTTCTCCTCCGGCGCCGATCTCTTGTCCGCCGATCAACTAGGCCTGTTCCTGGTGAAGCACCAAGGCGAATCGGACTTGACCTCTTCAGATCCCGCCCAAATAGTTGAGAAGATCTTGCAATTGCGGGATCAGAATGAGGAGATTGAAGCTACGGAGGCCGCCAGCTCCTTTGAGGGTATCAGTCTCGACGAATTCTTCCATTTCCTACTCCTCGATGATTTCAATGCCCCCTTAAAATCCCAAGTGCATCATGATATGAATGCTCCGCTGTCACATTATTTCATATATACAGGACACAATTCTTATCTGACTGGGAATCAACTGAGCAGTGATTGTAGTGATGTTCCAATTATAAAGGCTTTGCTTGAAGGTGTGCGAGTAATTGAACTAGATTTATGGCCAAATTCAACTCGAGATGATGTTATTGTAGTTCATGGAAGGACTCTCACCTCTCCTGTTGCACTCATTCAATGTTTGAAGTCGATAAAAGAGTATGCATTTGTTAAATCTCATTACCCAGTCATTATAACTTTAGAAGATCACCTCCCAACAGATCTTCAAGCTAAAGTTGCAGAGATGGTAACACAAACATTTGGAGAAGCCCTTTACTATCCTGAGACAGATGGTATGGCAGAATTCCCCTCACCAGAATCATTGAAAGATCGAATTCTTATATCAACCAAACCACCAAAAGAGTATCTTGAATCTGAATGTTCATCGCCAACAGGTCAAACGGATGAAACAGAAACTGATAGCAAGGATGAAACTGATGAAGAAGTGGAAGATTTGAATGCAAGTGAAGAAAAATCACTCCAGCAATGTGCACCTGCATATGGGCGCTTAATCACAATCCATGCTGGGAAACCTAAAGGTCAAGCAAAAGATTATTTAAGCGTGGCTGGTGATGTCAGACGCCTAAGCATGTGCGAACAGATGGTTCAAAAGACCTGTGCATCTCATGGGGCCGCAGTTATCAGGCAATTGCCAGTAGTAACCGCAATAAAATTTTTCGAAATCACTTTTAAGAATATTCTCAGGGTTTATCCGAAAGGAACACGTGTCTCTTCATCAAATTACAGACCACATATTGGGTGGAATTATGGAGCTCAGATGGTTGCGTGCAACATGCAGGGGTATGGGAGATCACTATGGTTCATGCAAGGGATGTTCAGAGCAAATGGAGGTTGTGGCTATGTGAAAAAGCCGGACTGCTTAGTGGAAAGTGGTCCCAATGGTGAGGTTTTCGATCCTACCAGAACATTGCCAGTGAAGACGACATTAAAGGTTAAAGTATATTTAGGGACCGGATGGAGCTCAGATTTCAGCCAAACGCACTTTGATTCATTCTCTCCACCAGACTTTTACACAAAGGTTTGTATAGTTGGAGTAGATAATGATAAAGTCAAGAAGAAAACAAAGGTAATAGACGACGATTGGTTTCCAGTTTGGAATGAAGGGTTTGAATTCCCTCTGACTGTTCCAGAGTTGGCTTTACTGAGGATAGAAGTTAGAGAGTATGACAGGCATGAAGCGGATGACTTTGGTGGGCAGGCGTGTTTGCCAGTTCCTGAGCTAAGACATGGATTCCGCAATGATAGAGCCACGGAAGATGAAAAAGCAAGGACAAAAACAAACAGTACAGGAAACAAAAGTCTCAGCAAGACAGAAGAACTGAAACGAAAGAGCTACAAGTTTCTTCTGAGATCTATGCCAAAGGTCAGTTACACACTTATTATACTCCTACCAGGTTTTTCCACACATGAAAAAGGTTCCTTCAATTCTTCCATCATCGCATCTCATTTTCTCCTCGGCAGCATAACTCTCAACTTCCACTCATCTCCTCACTTATCGGAGTTAGGCGCACGCATGTCGAGACAGACTTACAGAGTCTGCTTCTGCTGCCGCCGGGGGTTCAGGCTTCGCGCCTCCGAGGCACCGCCGGAGATCAAGTCGCTTTTTGATAGCTACTCTGAGAATGGCTTTATGACTGCTGCTCACCTCCAGAGGTTCTTGATTGAGGTTCAGAAAGAAGATAAAGCCACCGAAGATGAAGCTCAGGCCATCATCGACGGCCTCAAGCATTTGATCATTTTTCATCGGAGGGGTCTCGCTCTTGACGGTTTCTTCAAGTACCTCTTCAGTGACCAAAACCAACCTCTCTCGCCTTCTCTTGGGGTACACCATGATATGACAGCACCGTTGTCTCATTATTTCATATTCACTGGTCACAATTCCTATCTCACTGGAAATCAGCTTATTGGTGATTGCAGTGATGCCCCCATTATACATGCGCTGCAAAGAGGTGTAAGAGTGATAGAACTGGACATATGGCCTAATGATTCAAAGGATGATGTGCATGTTTTTCATGGAGGGACTCTGACTGCTCCTGTAGAGCTTATCAAATGCCTGAGGTCCATTAAAGAGAATGCCTTTTCTGCGTCTGAATATCCAGTTGTAATAACTCTAGAAGACCATCTTACTCCAGATCTGCAGGCTAAAGTGGCTGAGATGGCCACTCAAACATTTGGAGGCATGCTATATTCGCCTGGCATGGAATGCTTGAAGGAATTTCCTTCTCCAGAATCACTTAAAAGAAGGATTATGATATCAACTAAACCACCTAAGGAGTACCTTGAGGCCAAAGAAGTAAAGGAAAAGGGGGACGAGACACTGAAGGCAAAGGCCTTAGGTGATGAAGAAGCTTGGGGGAAGGAAGTCCCATGCTTGAAAGGTGGCACTTTAGCCGATGACAAGAACGATGTGTGTGAAGAAGTTGTTGAAGAGGAGGATCCTGATGAAGCAGATAAGTCACATCATAATGGAGCTCCTGAATATGGGCGTTTAATTGCCATTCATGCAGGCAAACCCAAAGGTGGAATAGACGAATGTCTGAAAGTGGATCCTGATAAAGTGCGACGTCTAAGCTTAAGTGAGCAACAGCTTGAGAAGATTTCTGTGACTCATGGAAAAGAAATTGTCAGGTTTACTCAGCGGAATATCCTGAGGGTGTATCCAAAAGGTACACGCATTGACTCGTCAAATTATAACCCACTAATTGGGTGGATGCATGGAGCTCAAATGGTTGCATTTAACATGCAGGGGCATGGGAGATCACTTTGGGTGATGCAAGGAATGTTCAAAGCCAATGGTGGATGTGGTTATGTTAAAAAACCAGATTTCCTACTGAAGACTTTACCGAATGGCGGGGTCTTTGATCCTAAAACCAAGTTACCTGTTGAGACAACATTGAAGGTGACCGTATACATGGGAGAAGGATGGTCTAATGATTTCAAAGCAACCCACTTTGATAAATTCTCACCTCCGGACTTCTACACAAGAGTGGGAATAGCAGGAGTACCAGCCGATAGTGTGATGAAGAGTACAAAAGCAATAGAAGACAATTGGTTTCCTGCATGGAACGAGACATTCGAATTCCCTCTTACAGTTCCAGAGTTGGCAGTGCTTCGTATAGAAGTTCATGAATATGATATGTCAGAAAAAGATGACTTTGGTGGCCAAACATGCCTACCTGTTGCAGAGCTCAGAAGTGGAATTCGAGCAGTTCCACTACATAGCGTCAAGGGGGAGAAGTATAACTCTGTGAATCTCCTTATGCGCTTTGAGTTTCTTGGATCTTAA 3738 0.4385 MGTYHYKIFNCFNLKFTVSEPGPPEEVKYVFYKFSSGADLLSADQLGLFLVKHQGESDLTSSDPAQIVEKILQLRDQNEEIEATEAASSFEGISLDEFFHFLLLDDFNAPLKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALLEGVRVIELDLWPNSTRDDVIVVHGRTLTSPVALIQCLKSIKEYAFVKSHYPVIITLEDHLPTDLQAKVAEMVTQTFGEALYYPETDGMAEFPSPESLKDRILISTKPPKEYLESECSSPTGQTDETETDSKDETDEEVEDLNASEEKSLQQCAPAYGRLITIHAGKPKGQAKDYLSVAGDVRRLSMCEQMVQKTCASHGAAVIRQLPVVTAIKFFEITFKNILRVYPKGTRVSSSNYRPHIGWNYGAQMVACNMQGYGRSLWFMQGMFRANGGCGYVKKPDCLVESGPNGEVFDPTRTLPVKTTLKVKVYLGTGWSSDFSQTHFDSFSPPDFYTKVCIVGVDNDKVKKKTKVIDDDWFPVWNEGFEFPLTVPELALLRIEVREYDRHEADDFGGQACLPVPELRHGFRNDRATEDEKARTKTNSTGNKSLSKTEELKRKSYKFLLRSMPKVSYTLIILLPGFSTHEKGSFNSSIIASHFLLGSITLNFHSSPHLSELGARMSRQTYRVCFCCRRGFRLRASEAPPEIKSLFDSYSENGFMTAAHLQRFLIEVQKEDKATEDEAQAIIDGLKHLIIFHRRGLALDGFFKYLFSDQNQPLSPSLGVHHDMTAPLSHYFIFTGHNSYLTGNQLIGDCSDAPIIHALQRGVRVIELDIWPNDSKDDVHVFHGGTLTAPVELIKCLRSIKENAFSASEYPVVITLEDHLTPDLQAKVAEMATQTFGGMLYSPGMECLKEFPSPESLKRRIMISTKPPKEYLEAKEVKEKGDETLKAKALGDEEAWGKEVPCLKGGTLADDKNDVCEEVVEEEDPDEADKSHHNGAPEYGRLIAIHAGKPKGGIDECLKVDPDKVRRLSLSEQQLEKISVTHGKEIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQMVAFNMQGHGRSLWVMQGMFKANGGCGYVKKPDFLLKTLPNGGVFDPKTKLPVETTLKVTVYMGEGWSNDFKATHFDKFSPPDFYTRVGIAGVPADSVMKSTKAIEDNWFPAWNETFEFPLTVPELAVLRIEVHEYDMSEKDDFGGQTCLPVAELRSGIRAVPLHSVKGEKYNSVNLLMRFEFLGS 1245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1158 1245 Gene3D - 677 756 - -
Lele25g1158 1245 Gene3D - 23 113 - -
Lele25g1158 1245 SMART plcy_3 311 439 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele25g1158 1245 SMART plcy_3 978 1095 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele25g1158 1245 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 117 261 - -
Lele25g1158 1245 FunFam Phosphoinositide phospholipase C 454 580 - -
Lele25g1158 1245 MobiDBLite consensus disorder prediction 563 577 - -
Lele25g1158 1245 Gene3D Phosphatidylinositol (PI) phosphodiesterase 758 1106 IPR017946 GO:0006629|GO:0008081
Lele25g1158 1245 MobiDBLite consensus disorder prediction 283 297 - -
Lele25g1158 1245 CDD C2_PLC_like 1114 1242 - -
Lele25g1158 1245 SUPERFAMILY PLC-like phosphodiesterases 761 1096 IPR017946 GO:0006629|GO:0008081
Lele25g1158 1245 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 340 438 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele25g1158 1245 MobiDBLite consensus disorder prediction 265 302 - -
Lele25g1158 1245 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 426 564 IPR035892 -
Lele25g1158 1245 SUPERFAMILY PLC-like phosphodiesterases 117 440 IPR017946 GO:0006629|GO:0008081
Lele25g1158 1245 CDD C2_PLC_like 457 563 - -
Lele25g1158 1245 Pfam Phosphoinositide-specific phospholipase C, efhand-like 681 750 IPR015359 -
Lele25g1158 1245 PRINTS Phospholipase C signature 766 784 IPR001192 GO:0035556
Lele25g1158 1245 PRINTS Phospholipase C signature 1209 1219 IPR001192 GO:0035556
Lele25g1158 1245 PRINTS Phospholipase C signature 1033 1054 IPR001192 GO:0035556
Lele25g1158 1245 PRINTS Phospholipase C signature 1054 1072 IPR001192 GO:0035556
Lele25g1158 1245 PRINTS Phospholipase C signature 792 812 IPR001192 GO:0035556
Lele25g1158 1245 PRINTS Phospholipase C signature 889 906 IPR001192 GO:0035556
Lele25g1158 1245 SUPERFAMILY EF-hand 679 755 IPR011992 -
Lele25g1158 1245 Pfam Phosphatidylinositol-specific phospholipase C, X domain 763 905 IPR000909 -
Lele25g1158 1245 Pfam Phosphatidylinositol-specific phospholipase C, X domain 119 261 IPR000909 -
Lele25g1158 1245 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1115 1242 IPR035892 -
Lele25g1158 1245 SUPERFAMILY EF-hand 9 119 IPR011992 -
Lele25g1158 1245 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 1007 1093 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele25g1158 1245 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 367 437 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele25g1158 1245 SMART plcx_3 117 261 IPR000909 -
Lele25g1158 1245 SMART plcx_3 761 905 IPR000909 -
Lele25g1158 1245 ProSiteProfiles C2 domain profile. 443 568 IPR000008 -
Lele25g1158 1245 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 666 1242 IPR001192 GO:0035556
Lele25g1158 1245 Pfam C2 domain 460 561 IPR000008 -
Lele25g1158 1245 Pfam C2 domain 1115 1217 IPR000008 -
Lele25g1158 1245 Coils Coil 67 87 - -
Lele25g1158 1245 Gene3D C2 domain 1110 1243 IPR035892 -
Lele25g1158 1245 Gene3D C2 domain 454 592 IPR035892 -
Lele25g1158 1245 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 761 905 - -
Lele25g1158 1245 MobiDBLite consensus disorder prediction 563 586 - -
Lele25g1158 1245 FunFam Phosphoinositide phospholipase C 1110 1243 - -
Lele25g1158 1245 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 1008 1094 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele25g1158 1245 SMART C2_3c 459 567 IPR000008 -
Lele25g1158 1245 SMART C2_3c 1115 1223 IPR000008 -
Lele25g1158 1245 FunFam Phosphoinositide phospholipase C 114 452 - -
Lele25g1158 1245 ProSiteProfiles C2 domain profile. 1095 1225 IPR000008 -
Lele25g1158 1245 Gene3D Phosphatidylinositol (PI) phosphodiesterase 114 452 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1158 Lele-ChrLele25 7504698 7516712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1158 1 563 Acyl Lipid Metabolism Gene Families AT3G55940 50.754 0.0 555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0921 27 17141992 17145253 Lele25g1158 25 7504698 7516712 CCT
Lele25g1158 25 7504698 7516712 Lele25g1158 25 7504698 7516712 CCT
Lele25g1158 25 7504698 7516712 Lele26g1157 26 7490783 7494089 CCT
Lele25g1158 25 7504698 7516712 Lele27g0922 27 17148637 17153282 CCT
Lele25g1158 25 7504698 7516712 Lele28g1150 28 7482135 7485334 CCT
Lele25g1158 25 7504698 7516712 Lele26g1157 26 7490783 7494089 ECH
Lele25g1158 25 7504698 7516712 Lele25g1158 25 7504698 7516712 ECH
Lele25g1158 25 7504698 7516712 Lele27g0922 27 17148637 17153282 hybridization
Lele25g1158 25 7504698 7516712 Lele28g1150 28 7482135 7485334 hybridization