Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1157 ATGGCGAATTCACTCTCCCCCTTCACCTTCTTCTTCTCCGTCAACGTCTTCCTCATCGCCGCCGTCACCCTTTTCTCTTCAATCCCCTTCATCCATGCTCTGGGTTCCGGCGCCACTCTTGCCGTAATCGATGACTCCGGCACCGTCTGTGGCATCGTGGCAAGGGAACGGACGCAGCGCATTGAATGCTACCGTCGCGGGCAGATCGTTCCCGTTACTCCTAACATTTCTTTTTCGTCGATTTCCGGTGGGAGGAGCTACTTCTGTGGCCTTAGGTCCGGTAACTACAGTTTGCTTTGCTGGGATGCTGTTTCTTCCAACTCCAGCGGTTCCTTCCAAGGGAAGAGGCTTTACTTTAATTATACTGTTCTGTTGGAGAATCTGGCGGTTGGAGATACCCAAGTATGCGCGAGCGTCGTGGGTTCAGGCACCGTTCGGTGCTGGAGAACCAATGACATACCTCCGCCGGATCAATTTGCGACGATAACATCTGGGTCTGGCTTTTCTTGCGGGATCTTGAAGAATACTTCTCGGGTTCATTGTTGGGGAATGCAACCCCTTTCGGGTCAACTACTGAACGGATTCGGAGACATGCCCATGTTGAGTCTTGTTGCCGGCGATTCACATGTTTGTGGATTGAATTCAACAGGGTTTGTGGTATGCGGAGGAAGTAACAGTTCCGGGCAGCTTAGTGTTCCCCAACAAGGAGGACCTCTGGAATATTCTGGCTTGGCTCTCGGAGCTGAACATAGCTGCGCGATCAAGCAGTCGAATCGTTCGGTTGTTTGCTGGGGAGGCGGAGGGCAATTCTCGGCGAATGTTACAGAACAAACATCTTTCGAGTTAATTGTTTCTGGGTCAAATTTTACTTGCGGATTAGTCTCCGGCAATTTTTCTGTAATGTGTTGGGGACCTGGTTGGGGTAATAGTTCTGGCTTTAATCCTCTCGAGCTTCCTTTATCTCCGATTCTCCCAGGGCCTTGTGTTCAATCTTGTGAGTGTGGTCAATATCCTCAATATCAAAATCTGTGTTCTGGTTCTGGTACTATATGCAGGCCCTGTTCTCCAAACATTTCAGCCCCAGTGCCGCCGCCATCGAGTTCTCCGCCACCATTGGTTTCTCCTCCGTCGTCTCGATCAAAGGCATTGACAAGGGGTTTATTGGCATTCGCCATTGTTGGATCTGTTGGAGCTTTTGCCGGTATATGCACTATAATTTATTGCTTGTGGACTGGAGTTTGTTTTGGTAAGAAGAAAGTTCACAATTCTGTCCAACCCAGGATCACCAGAGATGGTAGTTCCAATAATGGAGGTGCAGTGAATTCTAGCAATAGCCCGCCGTCGAGATCATCCACCATTAGACGTCAGGGCTCAAGGATAATGAGGCGCCAGAGGAGCGGAACATCATCCACAAAGCATCCTGATAGGGCAGAGGAATTCACTCTAGCCGAGCTGGTGACAGCCACTAATATTTTTTCCCTTGAAAACAAAATTGGTGCTGGTAGCTTTGGTGTTGTGTACAGAGGCAAACTCGCTGATGGTCGCGAGGTGGCGATCAAGAGGGGCGAGATTGGTTCAAAGAAGAAGAAATTTCAAGAGAAAGAGAGTGCATTTGAGTCGGAACTCGCATTCTTGTCCCGGTTACACCACAAACACTTGGTCAGGCTAGTTGGTTTCTGTGAGGAAAAAGATGAGAGGCTCTTGGTGTATGAATACATGAAGAATGGAGCATTGCATGATCACTTGCATGACAAGAAAAATGTGGAAAAGAGTAGTAGCTTCTTGAATTCGTGGAAAATGAGGATCAAGATCGCGCTAGATGCTTCTCGAGGGATCGAATATCTCCACAACTATGCAGTCCCACCTATAATTCACAGAGACATCAAGTCTTCCAACATTCTTCTCGACGCGAATTGGACCGCTAGAGTGTCCGATTTTGGATTGTCATTGATGGGTCCGGACTCTGATCACGATTACCGGCCAACAAAGGCGGCGGGAACCGTAGGATACATCGATCCCGAGTACTATGGTCTGAATGTCTTGACAGCAAAGAGTGATGTTTATGGTTTTGGAATAGTACTGCTAGAACTCTTAACTGGAAAGAGAGCTATATTCAAAGATGGTGAAAATGGTGGCACCCCAGTGAGTTTGGTGGACTTTGCAGTGCCTCCGATAATGGCCGACGAATTGCCCAAGATTCTGGACGCGAGGGTTGGGCCACCGGAGATGAACGAGGCGGAGGCGGTGGAGCTAGTGGCATATACCGCAATGCACTGCGTGCATTTGGAAGGGAAAGACAGACCAACAATGACTGACATTGTGGCCAATCTGGAGAGGGCTTTGTCTCTTTGTGATAGTAGCCATGGCAGCATCTCAAGTGGCACAATCTCTATTGTTTCAGAATGA 2406 0.4867 MANSLSPFTFFFSVNVFLIAAVTLFSSIPFIHALGSGATLAVIDDSGTVCGIVARERTQRIECYRRGQIVPVTPNISFSSISGGRSYFCGLRSGNYSLLCWDAVSSNSSGSFQGKRLYFNYTVLLENLAVGDTQVCASVVGSGTVRCWRTNDIPPPDQFATITSGSGFSCGILKNTSRVHCWGMQPLSGQLLNGFGDMPMLSLVAGDSHVCGLNSTGFVVCGGSNSSGQLSVPQQGGPLEYSGLALGAEHSCAIKQSNRSVVCWGGGGQFSANVTEQTSFELIVSGSNFTCGLVSGNFSVMCWGPGWGNSSGFNPLELPLSPILPGPCVQSCECGQYPQYQNLCSGSGTICRPCSPNISAPVPPPSSSPPPLVSPPSSRSKALTRGLLAFAIVGSVGAFAGICTIIYCLWTGVCFGKKKVHNSVQPRITRDGSSNNGGAVNSSNSPPSRSSTIRRQGSRIMRRQRSGTSSTKHPDRAEEFTLAELVTATNIFSLENKIGAGSFGVVYRGKLADGREVAIKRGEIGSKKKKFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALHDHLHDKKNVEKSSSFLNSWKMRIKIALDASRGIEYLHNYAVPPIIHRDIKSSNILLDANWTARVSDFGLSLMGPDSDHDYRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGFGIVLLELLTGKRAIFKDGENGGTPVSLVDFAVPPIMADELPKILDARVGPPEMNEAEAVELVAYTAMHCVHLEGKDRPTMTDIVANLERALSLCDSSHGSISSGTISIVSE 801
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1157 801 ProSiteProfiles Protein kinase domain profile. 492 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1157 801 Gene3D - 195 319 IPR009091 -
Lele25g1157 801 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 200 787 IPR044815 GO:0004674
Lele25g1157 801 Pfam Protein kinase domain 493 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1157 801 Gene3D Phosphorylase Kinase; domain 1 453 572 - -
Lele25g1157 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Lele25g1157 801 MobiDBLite consensus disorder prediction 426 474 - -
Lele25g1157 801 SUPERFAMILY Protein kinase-like (PK-like) 469 777 IPR011009 -
Lele25g1157 801 FunFam Serine/threonine-protein kinase-like protein CCR4 573 794 - -
Lele25g1157 801 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
Lele25g1157 801 FunFam serine/threonine-protein kinase-like protein CCR1 461 572 - -
Lele25g1157 801 CDD STKc_IRAK 498 779 - -
Lele25g1157 801 SMART serkin_6 492 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1157 801 Gene3D - 22 193 IPR009091 -
Lele25g1157 801 SUPERFAMILY RCC1/BLIP-II 33 267 IPR009091 -
Lele25g1157 801 Gene3D Transferase(Phosphotransferase) domain 1 573 790 - -
Lele25g1157 801 MobiDBLite consensus disorder prediction 426 455 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele25g1157 Lele-ChrLele25 7499948 7502353 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1157 9 801 Receptor kinase-like Gene Family AT3G55950 61.725 0.0 905
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lele25g1157 Pkinase 5.7e-45 CL0016
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1157 25 7499948 7502353 Lele25g1157 25 7499948 7502353 CCT
Lele25g1157 25 7499948 7502353 Lele26g1156 26 7484351 7486741 CCT
Lele25g1157 25 7499948 7502353 Lele27g0924 27 17169492 17171897 CCT
Lele25g1157 25 7499948 7502353 Lele28g1149 28 7475881 7478271 CCT
Lele25g1147 25 7390741 7402155 Lele25g1157 25 7499948 7502353 CCT
Lele25g1157 25 7499948 7502353 Lele27g0924 27 17169492 17171897 hybridization
Lele25g1157 25 7499948 7502353 Lele28g1149 28 7475881 7478271 hybridization