Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1155 ATGGCCGTCTCCAATGTCGACGCCGTCATCGAGTTCTTGAGGAAGAATGGATTCTCCGAGGCTGAGTCTGCCCTCAAGCAGGACATAATCGAAAAACGTGATCTGGGATCCTTTGACTACGAGAAATTCTTCTTCCCTATGGTGCCTCCGCCGCCGCCGGTCAGGGTCCGATCGTCTTCCCGGCGCTCCCCCATAGACCGCTCCTCCGAAGACGAGTTTGTGAGCTTGAGTTCTTCTACTTCTGATGTTTGTTCTTCTGAATTCATCAATCCGTACGGAATTCGTTCCTCGTCTCAGAATGATTCTGAATCTTCATCTGATAGACAATCTCAATTTGGAACGGCACGAGATCACCCCGAATTCGATACACAAAACGAATCATATTGGTACAACGTGAAAGATGATGACAATTTCATGACTCCAAACTTTGAAGGGCCAGATTTTTTTAGCTCTCCAACTGAGGACAAGTTCATAACAACATCAGAAATGGACAATAATCAGCACGAGAATCCTCTGAATCTTAGTCACATCTCTGAAGAAAATGGTGGTTGTATAGAAAAGACATGCCTTCCCAACAATTCATTTGAAGGGGATGAGAAAGATCAGCTGAAAGCAGGATTATTGGAAAAGGAAATTCATCTGAATGATTCTTCTCACTCGAAGGTTGCTGGGAAGTTTTCTGATACGGACCACACGTTTGACTTTTACACAAGCAATGGTATTAGTAAAGGGAACAAAGGCTCCTATGACTTGACAATTCAAGTTGCTGAAATCAAGAGCTCGAAAGCTCAAGATGCTGGAGGATTAACTGAAGAATGCCATGAATCAGATGCTGCTGCAGATAACACAGATGATGAACTGATAAAATACATTCCTGATGATGACTATGAAGTATTTGACTTAAGAATTATTCATAGAAAAAGCAGGACTGGTTTTGAAGAAAGCAAGGATCTTCCAATTGTACTAAATACGGTTATAGCTGGAAGATACTATATAACAGCTTATATTGGTTCCGCAGCCTTCAGTAAGGTTGTTCAGGCACATGATCTTCACACAGGAGTGGATGTTTGCTTGAAGATCATAAAAAATGACAAAGACTTCTTTGATCAAAGCTTAGATGAAATCAAACTTCTTAAACTTGTCAATAAGCATGACCCAACTGATCAATTCCACATACTGCGCCTTTATGATTACTTCTACAATCAGGAACATCTATTCCTTGTTACCGAGCTTCTGCGAGCAAACTTGTACGAATTTCGGAAATTCAACCAAGAATCTGGTGGTGAAGCATATTTTACAATAAGCAGGTTGCAGCACATTACTCGTCAATGTTTGGAGGCGTTGCAATACTTGCATAGCTTAGGAATCATTCACTGTGACCTGAAACCAGAAAACATTCTGATAAAAAATTACAAAAGATGTGAGATCAAGGTCATTGATCTGGGAAGTAGTTGCTTTCAAACAGACAACTTGTGTCTATACGTGCAATCGCGATCCTACCGGGCTCCTGAAGTGATACTAGGCCTCCAATACGATGAAAAGATCGATATATGGTCCCTCGGCTGCATCTTAGCCGAACTATGCTCCGGCGAAGTGCTCTTTCCAAACGACGCAGTTGTCATGATTCTTGCACGTATGATTGGAATGCTTGGCCCTATTGATCTTGAGATGTTGGTCAAAGGACAAGAGACTCACAAGTACTTCACCAAGGGATTTAATCTTTATCACGTCAATGAGGAGACAGATCAAGTTGAGTGTACAATTCCAGATTCATCATTGGAGCAGCATCTGCAGGTTGCAGATACTATGTTCATAGACTTTGTAAGATATTTGCTTAGCATAAACCCCAAAACAAGACCTACTGCAACGCAGGCTTTGAGACATCCTTGGCTTTCTCATGTTTGCAAGTCAAAGGACAAGAATGCTGGTTGA 1932 0.4172 MAVSNVDAVIEFLRKNGFSEAESALKQDIIEKRDLGSFDYEKFFFPMVPPPPPVRVRSSSRRSPIDRSSEDEFVSLSSSTSDVCSSEFINPYGIRSSSQNDSESSSDRQSQFGTARDHPEFDTQNESYWYNVKDDDNFMTPNFEGPDFFSSPTEDKFITTSEMDNNQHENPLNLSHISEENGGCIEKTCLPNNSFEGDEKDQLKAGLLEKEIHLNDSSHSKVAGKFSDTDHTFDFYTSNGISKGNKGSYDLTIQVAEIKSSKAQDAGGLTEECHESDAAADNTDDELIKYIPDDDYEVFDLRIIHRKSRTGFEESKDLPIVLNTVIAGRYYITAYIGSAAFSKVVQAHDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPTDQFHILRLYDYFYNQEHLFLVTELLRANLYEFRKFNQESGGEAYFTISRLQHITRQCLEALQYLHSLGIIHCDLKPENILIKNYKRCEIKVIDLGSSCFQTDNLCLYVQSRSYRAPEVILGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMLGPIDLEMLVKGQETHKYFTKGFNLYHVNEETDQVECTIPDSSLEQHLQVADTMFIDFVRYLLSINPKTRPTATQALRHPWLSHVCKSKDKNAG 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1155 643 MobiDBLite consensus disorder prediction 92 125 - -
Lele25g1155 643 PANTHER DUAL SPECIFICITY PROTEIN KINASE 97 632 - -
Lele25g1155 643 FunFam Serine/threonine-protein kinase ppk15 409 632 - -
Lele25g1155 643 SUPERFAMILY Protein kinase-like (PK-like) 319 635 IPR011009 -
Lele25g1155 643 CDD PKc_DYRK_like 330 631 - -
Lele25g1155 643 Pfam Protein kinase domain 334 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1155 643 Gene3D Phosphorylase Kinase; domain 1 325 411 - -
Lele25g1155 643 SMART serkin_6 330 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1155 643 ProSiteProfiles Protein kinase domain profile. 330 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1155 643 Gene3D Transferase(Phosphotransferase) domain 1 384 631 - -
Lele25g1155 643 FunFam Putative serine/threonine-protein kinase dyrk2 324 411 - -
Lele25g1155 643 MobiDBLite consensus disorder prediction 53 76 - -
Lele25g1155 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Lele25g1155 643 MobiDBLite consensus disorder prediction 92 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1155 Lele-ChrLele25 7480671 7483522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1155 327 626 MAP Kinase Gene Family AT5G19010 33.125 1.01e-34 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lele25g1155 Pkinase 3.9e-53 CL0016