Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1154 ATGCCTACGCCCGTCGGAGTAGCCAAGCAATGCTTGACGCCGGATGCAGCTCGCGCTCTCGAAGAAGCCGTCTCCGTCGCGCGCCGTCGTGTGCACCCCCAGACCACCTCGCTTCATGCTGTCTCCGCCTTGCTTTCGTTGCCGTCGTCCACCTTACGTGACGCCTGTGCTCGTGCCCGGAACTGTGCCTACTCGCCTCGGCTTCAATTCAAGGCGCTAGAGCTGTGCCTGAGTGTATCGCATGACCGGGTCCCATCGACTCAACTCGCCGACGACCCGCCAGTATCTAACTCGCTCATGGCCGCCATCAAGCGCTCCCAGGCGAGTCAGAGAAGGCAGCCTGAGAATTTCAACATTTACCATCAAATCTCGCAGCAGCCTAATTCAGTTTCGTGTGTGAAAGTTGAGCTTCAACAATTGATATTATCGATTCTCGACTACCCGGTCGTGAGCCGTGTATTCCGAGAAGCGGGTTTTCGAAGCTCCGAAATTAAACTTGCTATTCTTCGTCCTCTCCCACAGTTACTCAGGTACTCGCGCTCCAGAGTCCCCCCTATATTCCTCTGCAATTTGACGGAGCATCCGGACCCGGGTCGTCGGAGCTTCAGTTTCCCGTTTCCTGGGTCTTTTGGAACCAGCGACGGCGGCGCTGAGAATTACAAAAGAATCGGAGATGTGCTTTGCAGGAGCAGAGGGAGGAATCCCCTGCTTTTGGGTGTATGCGCAGATGATGCTCTGTGTAGTTTCACAGAAGATGTTAATAAACAAAGAGACGGTACTTTGCCAGTGGAGTTATCTGGATTACGCGTGATATGCATAGGAAAAGATATTTCCAAGTTTGTCTTTGATAATTGTGGTAACGAGACTTTCAGTTCAAAGCTCAAGGAGATTGCTCAAATGGTAGAGCAGGGAGTAGGACCTGGTTTGGTGGTGAATTTTGGGAACTTGAAGTCTTTGATTGATGAGAATGCCTCAAATGAAGCAGTGAATTATATTGTTGCTGAATTGGCGAAGTTGTTGGAGCGTAATTATGGCAAGTTTTGGTTGATGGGAGCTGCGGCGAGCTATGAGTGCTATATGAAATTTATCGGAAGGTTTCCATCCATTGAGAAGGATTGGGACTTGCAGCTTCTGCCCATCACGTCTGTTCGGCCTCAGGATGAATCATATCAGAGGCCTAGGTACAGCTTAATGGATTCATTTGTCCCATTTGGTGGCTTGTTTTCTTCACCTTCTGATTTGAAAGGGGGCTCATATTATTGTGTTCCCCGTTGCCTTCATTGTGGTGAAAGTTGTGTGCAAGAAGTGCTTCCAGCTTCAAATGAGAGGCTGTCTGCTTCGTCTGCTGATCCTTACCAATCTAATTTACCTCCACGGTTGCGGACTGCTGACCTTGGCATAACAAAAGGGCCGAATGATAAGACAAAAGAAGATAGTGTTCGGCTGGATACTAGTGAATCTGGGCCTATCGAGAAATTGGATGAGACATGCCAGCATCTGCTTAATACTCAGCAATTATCTGAAGCAATTCCTTGTCAAACTGTCATGAGTTCCCAATGCTCTGATGGTAAAAAGGCAGATACTGACAATGGCAGCAACAAAATTTCATATGCATCACCTAGCGTGCACATCGATCTCAATTCTACTGCGCCCATTGCAGAAGAGATGGTTTCTACATCACATTCAAGTATTCCTCCTCCTATGGTTTCCGAAGCAAATCAGGAGAAACATGCATCTAAAGCCTTAGAGATATTCCAGAAAGCAAAAGATCTTGAGTCAGGTGACCTAAGATCATGCAACATGTCCAATTCAAGCATGTGCGATGGTAGCCAATTGTCTCCCTCATCTTTGACTTCTGTAACCACAGATCCAGGTATAGGAACTTGCTTTTATCCTACAGGCAACAAATCTAAGAAACCAACTATGGGGGTTCCAAAGGAAATTGCGAGTCCCTTCGCTTCAAACTATAATTTAGTTAACAGGGATGTCTTTAAGCATCCAGTCCAGTCTTCATCCTGCTTAAGTTCTGACCATTCTGGACAATATGATCTAAGAAATCCTAAACTTCTTTTTGGAGCTCTTGCCAAAAAGGTTACCTGGCAGGATGAAGCCTTACAAAGCATTGTAAAAACAATATCTTACTGTGACACAAGCAGGGGCAAATGCCTACGAGGGGGCATATGGATGAATTTTGTAGGAACTGATAGGATTGGTAAGAAGAAAATTGCTGTTTCTCTGGCTGAGATTTTGTATGGAAGCCAGGAAAGCTTTATTTTTGTGGATCTAAATCATGAGGAAATAAATGGACGTGATGTGAAATTTAGAGGAAAGACTATTCTTGATGTTTTAGTTGCGGAGTTGTGCAAAAATCCGTTGTCCGTGGTTTTCCTTGACAATGTAGACATGGCTGATATGATCGTTCAGAATAGTTTATCTCAAGCTATCAAGACTGGAAAAATTATAGACTCGTGTGGAAGAGAAGTTGGTGTAAACAATGCAATAATTGTGACATCTTTCTCAGTTCAAGAAGATAATTGGAATTGCACACCAAAGACAGAATTCTCCGGCTATTCCGAGGAAAGCGTATCATGGACAAAAGGGGTACCATTCATGATAAAAATTGAACATGTAATTGGGGACATCGGAAGTCCAAGCCTTGCTGAACTTAAATGTTCAACAGAGGACGTTCCCGATCCAATCCTTGTAAATAAAAGAAAGCTGAGTTGTGACAATGTCCTTAATGATCAGCACAAAACCTTAGAAACGGCTAAAAGGGCTCACAAAATTTCAAATTGTTTTCTGGATTTAAATGTCCCGGCAGAAGAGAACGAACTGCAATTTATGGATGAAGGAAACCCTGAAGGTGTCTCTTCTACAACACAAAACCCCTGGTTGCAAGAATTGTATAACCAGGTTGATGAAACAATCATCTTGAAACCATACAATTTTGATGCACTTGCAGATAGAGTATTGAAAATTATCAGAAGGATCTTCCAAAAGATTCTCGGATCCGAGTGCTCACTACAGATAGAGTCAGAAGTCATGGAACAGTTACTTGCAGCTGCATATGTCTCAGAAGGGGACGTGCCAGTGGAGGATTGGGTGGAGCAAGTTCTTAGTGGAGGATTTACAGAGATACAGAGAAGGTACAGCCTCTCTGCTCGTTCTATCGTGAAACTTGCTACATGCCAGGAGCAAGCTCCTGGTGTGTACCTTCTTCCCCCAAGGATAATCATAGACTGA 3243 0.4477 MPTPVGVAKQCLTPDAARALEEAVSVARRRVHPQTTSLHAVSALLSLPSSTLRDACARARNCAYSPRLQFKALELCLSVSHDRVPSTQLADDPPVSNSLMAAIKRSQASQRRQPENFNIYHQISQQPNSVSCVKVELQQLILSILDYPVVSRVFREAGFRSSEIKLAILRPLPQLLRYSRSRVPPIFLCNLTEHPDPGRRSFSFPFPGSFGTSDGGAENYKRIGDVLCRSRGRNPLLLGVCADDALCSFTEDVNKQRDGTLPVELSGLRVICIGKDISKFVFDNCGNETFSSKLKEIAQMVEQGVGPGLVVNFGNLKSLIDENASNEAVNYIVAELAKLLERNYGKFWLMGAAASYECYMKFIGRFPSIEKDWDLQLLPITSVRPQDESYQRPRYSLMDSFVPFGGLFSSPSDLKGGSYYCVPRCLHCGESCVQEVLPASNERLSASSADPYQSNLPPRLRTADLGITKGPNDKTKEDSVRLDTSESGPIEKLDETCQHLLNTQQLSEAIPCQTVMSSQCSDGKKADTDNGSNKISYASPSVHIDLNSTAPIAEEMVSTSHSSIPPPMVSEANQEKHASKALEIFQKAKDLESGDLRSCNMSNSSMCDGSQLSPSSLTSVTTDPGIGTCFYPTGNKSKKPTMGVPKEIASPFASNYNLVNRDVFKHPVQSSSCLSSDHSGQYDLRNPKLLFGALAKKVTWQDEALQSIVKTISYCDTSRGKCLRGGIWMNFVGTDRIGKKKIAVSLAEILYGSQESFIFVDLNHEEINGRDVKFRGKTILDVLVAELCKNPLSVVFLDNVDMADMIVQNSLSQAIKTGKIIDSCGREVGVNNAIIVTSFSVQEDNWNCTPKTEFSGYSEESVSWTKGVPFMIKIEHVIGDIGSPSLAELKCSTEDVPDPILVNKRKLSCDNVLNDQHKTLETAKRAHKISNCFLDLNVPAEENELQFMDEGNPEGVSSTTQNPWLQELYNQVDETIILKPYNFDALADRVLKIIRRIFQKILGSECSLQIESEVMEQLLAAAYVSEGDVPVEDWVEQVLSGGFTEIQRRYSLSARSIVKLATCQEQAPGVYLLPPRIIID 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1154 1080 CDD AAA 737 838 - -
Lele25g1154 1080 Gene3D - 10 170 IPR036628 -
Lele25g1154 1080 ProSiteProfiles Clp repeat (R) domain profile. 7 174 IPR004176 -
Lele25g1154 1080 MobiDBLite consensus disorder prediction 446 485 - -
Lele25g1154 1080 Gene3D - 659 866 IPR027417 -
Lele25g1154 1080 MobiDBLite consensus disorder prediction 470 485 - -
Lele25g1154 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 690 841 IPR027417 -
Lele25g1154 1080 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 3 1048 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1154 Lele-ChrLele25 7459199 7465760 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1154 25 7459199 7465760 Lele25g1154 25 7459199 7465760 CCT
Lele25g1154 25 7459199 7465760 Lele26g1153 26 7446381 7451113 CCT
Lele25g1154 25 7459199 7465760 Lele27g0927 27 17204610 17210856 CCT
Lele25g1154 25 7459199 7465760 Lele28g1146 28 7438307 7444097 CCT
Lele25g1142 25 7369286 7369816 Lele25g1154 25 7459199 7465760 CCT
Lele25g1154 25 7459199 7465760 Lele25g1168 25 7616395 7620438 CCT
Lele25g1154 25 7459199 7465760 Lele26g1167 26 7586489 7590360 CCT
Lele25g1154 25 7459199 7465760 Lele27g0911 27 17064114 17068142 CCT
Lele25g1154 25 7459199 7465760 Lele28g1159 28 7563425 7567281 CCT
Lele25g1154 25 7459199 7465760 Lele26g1153 26 7446381 7451113 ECH
Lele25g1154 25 7459199 7465760 Lele25g1154 25 7459199 7465760 ECH
Lele25g1154 25 7459199 7465760 Lele27g0927 27 17204610 17210856 ECH
Lele25g1154 25 7459199 7465760 Lele28g1146 28 7438307 7444097 ECH
Lele26g1153 26 7446381 7451113 Lele25g1154 25 7459199 7465760 ECH
Lele27g0927 27 17204610 17210856 Lele25g1154 25 7459199 7465760 ECH
Lele28g1146 28 7438307 7444097 Lele25g1154 25 7459199 7465760 ECH
Lele01g1219 01 7353530 7358347 Lele25g1154 25 7459199 7465760 ECH
Lele02g1489 02 19089372 19094181 Lele25g1154 25 7459199 7465760 ECH
Lele03g1232 03 7316094 7320925 Lele25g1154 25 7459199 7465760 ECH
Lele04g1474 04 19938523 19943327 Lele25g1154 25 7459199 7465760 ECH
Lele25g1154 25 7459199 7465760 Lele01g1219 01 7353530 7358347 ECH
Lele25g1154 25 7459199 7465760 Lele02g1489 02 19089372 19094181 ECH
Lele25g1154 25 7459199 7465760 Lele03g1232 03 7316094 7320925 ECH
Lele25g1154 25 7459199 7465760 Lele04g1474 04 19938523 19943327 ECH
Lele25g1154 25 7459199 7465760 Lele27g0927 27 17204610 17210856 hybridization
Lele25g1154 25 7459199 7465760 Lele28g1146 28 7438307 7444097 hybridization