Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1150 ATGTTTGCTAAATTCTTTCCCAAACATACACAAGAACAACGTCCTCAGCATAATGTGGGACAAGGAAGTTTTACATCAGCAGATTTGGATCCCAAAGTTGTTCTTCACTATGGTGTTCCATCAACTGCATCTATCCTGGCTTTTGATCACACTCAACGTCTGTTGGCAATAGGAACTCTAGATGGTCGGATAAAGGTAATTGGTGGTGACAACATTGAAGGGATTCTTTTCTCCCCAAAGCATTCGTCATTAAAAAATTTAGAGTTCTTGCAAAATCAAGGTTTTCTTGTCAGTGTCTCAAATGATAATGGAATACAGGTTTGGGATTTGGAAAGTAGGCAAATAGCTTCTTCTTTACAGTGGGAATCTACTATAACTGCCTTCTCTGTTATCTATGGCACTAGTTACATGTATATTGGAAGCGAGCATGGAATGGTATATGTTTTGAAGTTTGACACTGAAGACAGAAAACTTTTGATCTTGCCTTACTATGTTCCCACCAATGTAATTGCTGAAGCAGCTGGGATGTCACTTGATTGTGTTTCGGTGGTCAGAGTTCTTCATCAACCTTCTTCTGAGGGAAACAGACTGCTGATTGCATATGAGAATGGCGTGCTGGTACTATGGGATGCTTCTGAAGATAAAGTTGTTCTCATCAGAGGACATGGGGACCTTGAATTAAAGGATAAACAAATGGTTACTCATCTAAATAACACTGAGGATATGCTGTCTGATAATAAATTAGACCATAAAGAAGACAAGGAGATAAGCTCTGTCTGTTGGGCATCTAATAATGGATCAGTTATTGCTGTTGGTTACATAGATGGTGATATAATGTTCTGGGACTTGTCAGCTGCTGACTCTTCCATTGGTCATCAAGCTAAAAAAATGTCAAATCATGTTGTCAAGCTTCAATTATCATCATCAGATAGAAGACTACCTGTCATTTTTCTACATTGGTGTGCAAATAGATCAAACAATAATACTGGGGGCCTTCTATTTGTTTATGGTGGTGATGAAATAGGGTCTCAAGAAGTTCTGACAGTTTTGAGTGTTGATTGGTCCTCTGGGATTGAAAGTCTCAAATGCATTGGCCGTATTGATGTTACACTTAGTCGTTCTTTTGCTGATATGGTTTTATTAGCAACTGATTCTTCTTCAGACAGAGGTTGTAATATGCTATATGTATTGACAAATCCTGGACAGCTGCATCTTTATGACAGTGCTTGCTTGTGTTCCTTAATGTCTCAACATGAAAAAAATGCATTTGTTCCTTCAATGGAATATCCCATGGTCATACCCACTCTTGAACCGTACATGACAATAGCAAAGCTTGGTGTGGTAAATGGAGATGGGAAGTTATATCAGGCCTTGTCTGAGATCTTATTAGCTGCTAAGCATAGTGCAGCAAAAGATCAGACAAGTAGTGGTATCAAGTGGCCTTTGACTGGTGGAGTTCCAGGTCAGCTTTTGAAAGAAGACCTTCATGTCCTTCAAATGTACATAGCAGGTTACCAAGATGGATCTATACGGATATGGGATGTCACACATCCTTCTTTGACACTAGTGTACAATATGACATCTGAGGTGAATGGTATCAAAATTGATAGTGCAAGTGCACCAGTATCAGCGTTGGACTTTTGTCCTGATTCTTTATGGTTGGCAGTTGGCAATAAATGTGGTCTGGTTCGTCTATATGGGCTAGTTGGGAGTTCAGATGAAACGAACGTGTACTTTGTGGCAGAAAATGAAAGCAAAGTTCAAAAGATCCCTAAAGGGAATGGACCTCATTGTACAGCAGTATTTTCCCTGCAAAGTTCTCCTGTATGCAGCCTAAAGTTTTCAAACCTGGGAAGGAAGCTTGCTGTTGGATATGAATGTGGAAGGGTTGCTATGCTTGATATAGTAGAACCATCAGTTCTCTTTCTCACCAATGAGGAATCTAGTGTATCTTCGCCAATAATTTCTCTGAATGTAAAATTTTCAGATAGTTGTAGCTTACCAAACAGTCCAGAGAAATCTGCAACCAATATTTCTGACAGTCCTGGAAAAGGGCTGTTAATTAATGCAACAAGAGATGCACACGTTTTTGCCACAGATACTGCATCAGGGGGCATGGTTTGCAATGTGCCAATAAACCCAAAGAAAGAATCAAATTTAATCTCCATGCATGTTATAGATGGTACTTGTGAACCATCAAGTGGAAAAGATTCATCCAACTCACCTCTGAATGCTGATTCTGGATCTGAACTTGGACAAGCTAACGTTCAGTCTGAAGATTCACCTGTTGAAGCTGAAGCTGTCACAACTGGAGAAAGTTCATATTTTGCTCATATGTTATTCAACTCACTTATTTTGCTTTGTTGTGAGAGTCAATTGAGTATACACTCTTTGAAATCCATGATTGAGGGTAGCAGTAAGTACATTCGGAGGGTGAACCTGGTAAACCGATGTTGTTGGACAACTACATTAATGAAAGATGGGAAAGAGTGTGGGTTGGTTGTGCTGTATGAAACTGGAGACATTGAATTAAGGTCCTTACCAACTCTGGAAGTGGTGGGGGAGTGCTCTTTAACGGCAATTCTAAGATGGAGCTTGAAGACCAACATGGAGAAGACAATATGTTCTTCCTCTAATGGACAACTTATTCTGGTCAACGGGAATGAAACTGCTTTTATATCACTGTTGAAATGTGAAAATGAACTCTGGATTCCTGAGTTATTGCCTCGTCTACATGATAGAGTCCTTGCAGCTGCTGTTGATGCCACAGCAAGCTTACCTTCAAACCAGAATGAAGAGCAGGGACGACAATTACCAGGTATCTTGGGTAATGTTATTAAGAACTTTAAGGCGGGTAAAGCGGACGAGGCAAATCAAGCAATTCATCATTATAGTTCTGCAAATTTAGAAAAACTTTTCTCTTGTCCCCCCTTCTTAAAGGCTTCCTCAGCCACAGCTGAAAAGCAAGATCCATTTGAGTTTAACATAGATGAAATTCACATTGACGAACCTTTAGTTGTTAACTATACTCAGAAAACTGATAGTGACAAAACAGATAGAGGAAAAGGAACAGACGACAAAGGAAAAGGAGCAGACAAACAGAAATTATTTGAGGGTGCAAGCACTGATACAAAACCGAGACAGAGAACAGCAGAAGAAATCAAGGCCAAATATAGAAAGGGGGGGACCGTGGATGCCTCTGCAGCTGCTGCACTTGCAAAGGAGAAGCTTCATGAACGCGGAGAAAAACTTCAGATGCTCAGCCAACATACTGAAGAACTGCAAAGTGGGGCGGAAGACTTTGCATCAATGGCAAAAGAACTTGCCAAAAGAATGGAAAACCGTAAATGGTGGCAGATATGA 3363 0.4014 MFAKFFPKHTQEQRPQHNVGQGSFTSADLDPKVVLHYGVPSTASILAFDHTQRLLAIGTLDGRIKVIGGDNIEGILFSPKHSSLKNLEFLQNQGFLVSVSNDNGIQVWDLESRQIASSLQWESTITAFSVIYGTSYMYIGSEHGMVYVLKFDTEDRKLLILPYYVPTNVIAEAAGMSLDCVSVVRVLHQPSSEGNRLLIAYENGVLVLWDASEDKVVLIRGHGDLELKDKQMVTHLNNTEDMLSDNKLDHKEDKEISSVCWASNNGSVIAVGYIDGDIMFWDLSAADSSIGHQAKKMSNHVVKLQLSSSDRRLPVIFLHWCANRSNNNTGGLLFVYGGDEIGSQEVLTVLSVDWSSGIESLKCIGRIDVTLSRSFADMVLLATDSSSDRGCNMLYVLTNPGQLHLYDSACLCSLMSQHEKNAFVPSMEYPMVIPTLEPYMTIAKLGVVNGDGKLYQALSEILLAAKHSAAKDQTSSGIKWPLTGGVPGQLLKEDLHVLQMYIAGYQDGSIRIWDVTHPSLTLVYNMTSEVNGIKIDSASAPVSALDFCPDSLWLAVGNKCGLVRLYGLVGSSDETNVYFVAENESKVQKIPKGNGPHCTAVFSLQSSPVCSLKFSNLGRKLAVGYECGRVAMLDIVEPSVLFLTNEESSVSSPIISLNVKFSDSCSLPNSPEKSATNISDSPGKGLLINATRDAHVFATDTASGGMVCNVPINPKKESNLISMHVIDGTCEPSSGKDSSNSPLNADSGSELGQANVQSEDSPVEAEAVTTGESSYFAHMLFNSLILLCCESQLSIHSLKSMIEGSSKYIRRVNLVNRCCWTTTLMKDGKECGLVVLYETGDIELRSLPTLEVVGECSLTAILRWSLKTNMEKTICSSSNGQLILVNGNETAFISLLKCENELWIPELLPRLHDRVLAAAVDATASLPSNQNEEQGRQLPGILGNVIKNFKAGKADEANQAIHHYSSANLEKLFSCPPFLKASSATAEKQDPFEFNIDEIHIDEPLVVNYTQKTDSDKTDRGKGTDDKGKGADKQKLFEGASTDTKPRQRTAEEIKAKYRKGGTVDASAAAALAKEKLHERGEKLQMLSQHTEELQSGAEDFASMAKELAKRMENRKWWQI 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1150 1120 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 9 1113 - -
Lele25g1150 1120 SUPERFAMILY WD40 repeat-like 499 896 IPR036322 GO:0005515
Lele25g1150 1120 SUPERFAMILY SNARE fusion complex 1073 1112 - -
Lele25g1150 1120 MobiDBLite consensus disorder prediction 731 764 - -
Lele25g1150 1120 SUPERFAMILY 3-carboxy-cis,cis-mucoante lactonizing enzyme 191 407 - -
Lele25g1150 1120 MobiDBLite consensus disorder prediction 1 22 - -
Lele25g1150 1120 MobiDBLite consensus disorder prediction 1013 1050 - -
Lele25g1150 1120 Gene3D - 34 163 IPR015943 GO:0005515
Lele25g1150 1120 MobiDBLite consensus disorder prediction 1010 1050 - -
Lele25g1150 1120 CDD R-SNARE_STXBP5_6 1055 1113 - -
Lele25g1150 1120 SMART WD40_4 241 282 IPR001680 GO:0005515
Lele25g1150 1120 SMART WD40_4 28 68 IPR001680 GO:0005515
Lele25g1150 1120 SMART WD40_4 595 634 IPR001680 GO:0005515
Lele25g1150 1120 SMART WD40_4 528 567 IPR001680 GO:0005515
Lele25g1150 1120 SMART WD40_4 69 109 IPR001680 GO:0005515
Lele25g1150 1120 Gene3D - 1050 1112 - -
Lele25g1150 1120 ProSiteProfiles Trp-Asp (WD) repeats profile. 77 118 IPR001680 GO:0005515
Lele25g1150 1120 Gene3D - 494 739 IPR015943 GO:0005515
Lele25g1150 1120 Pfam Synaptobrevin 1075 1117 IPR042855 -
Lele25g1150 1120 ProSitePatterns Trp-Asp (WD) repeats signature. 96 110 IPR019775 -
Lele25g1150 1120 MobiDBLite consensus disorder prediction 732 764 - -
Lele25g1150 1120 Gene3D - 165 430 IPR015943 GO:0005515
Lele25g1150 1120 ProSiteProfiles v-SNARE coiled-coil homology domain profile. 1055 1119 IPR042855 -
Lele25g1150 1120 SUPERFAMILY WD40 repeat-like 36 632 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1150 Lele-ChrLele25 7417077 7428474 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1150 25 7417077 7428474 Lele25g1161 25 7535674 7536847 CCT
Lele25g1150 25 7417077 7428474 Lele28g1152 28 7495557 7495976 CCT
Lele25g1150 25 7417077 7428474 Lele27g0930 27 17240301 17251255 hybridization
Lele25g1150 25 7417077 7428474 Lele28g1143 28 7406011 7410162 hybridization