Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1149 ATGCCAAACCTCTACGGTGGCGCCACCTCCGCTCCCCCTCCGACGCCTTCCGCTCACTCCAACAACAACCTCTTCCCCGCTTCCGACACCGCCGACGCCTTCTCCCGCCTCCTCCTCCACCGCCTACCACCTCCCACTCTCTCCCTCCCCACTCGCCGCTCCTCCTTCTCCGCCACCTCCCCTCCCGTCATATCCCTCTCCGCCGATCAAACCCCCACCGATGACCTACTCTCTTCCGTTTCCGACCTCGGATTCTTCCAGCTCACCCACCACTCTGTAGCTCCAGAACTCGCCCGCTCCGCGGAGTCAGAATCACTCCCCCTCTTCGATCTTCCTAGAGACCAGAAGGAATTGTTGCTCCCCAAAAACTGGCCTCTCGGATACGAATGTGACGACGATGACGATGACGATGACGATGACGGAGGTGAACAAGGTGAGTCATTCCGCCTGGATGGATCGTGTTCGACTGAGTCGACCGAGTTGTCTCTGGCTTCTCTGCGGGAGTTCACGCGAGCCCTTGAGAAGTTGGGATTAGAGATCATTGATTTGCTATCGAAAGCCATGGATTTCGAGAATCCCATGACGAACGACCCGACCCGATGTTGTTCGATGATGTGGATCTCGGAGTCCGACCGGCGCAAGGAGGCGGCCCCATCGGGCGGGTTTTACCCGTTCATAGTGGGGCTGCAGTACCAGATCAGGAGCCAGAAGCTGTCACTGTTGTCGGATTCGGGTTGGGTGTCCGTGTTACCCCATGTGGACTCAGTCCTGGTCACCATTGGTGACATTGCTCAGAAGGTATGGAGCAATGGGAGGTTGAAGAAGGTGAGAGGGAGGCCGGTGGTGGAAGAGACCGGTGGGCGAAGCATAAGCATGGCGTTGGTGGTGAGTCTTCCGACGGAGAGCAGGGTGGCCCCGATCCTTCGAAAGCGGGTGGCCGAGGAAGAAGAGAAAGGAAAGGAGGAGGAGGATGGAGAAGAAGTGGAAAAGAGAGGGGTGTTTCAGTCTTTTGATTTTGAGGATTATGCTTGGAGGGTGTACCATGAACGCCTCCTCTTTAAGGATCCTCTAGATAGGTATCGCATCGCTTAA 1092 0.5687 MPNLYGGATSAPPPTPSAHSNNNLFPASDTADAFSRLLLHRLPPPTLSLPTRRSSFSATSPPVISLSADQTPTDDLLSSVSDLGFFQLTHHSVAPELARSAESESLPLFDLPRDQKELLLPKNWPLGYECDDDDDDDDDDGGEQGESFRLDGSCSTESTELSLASLREFTRALEKLGLEIIDLLSKAMDFENPMTNDPTRCCSMMWISESDRRKEAAPSGGFYPFIVGLQYQIRSQKLSLLSDSGWVSVLPHVDSVLVTIGDIAQKVWSNGRLKKVRGRPVVEETGGRSISMALVVSLPTESRVAPILRKRVAEEEEKGKEEEDGEEVEKRGVFQSFDFEDYAWRVYHERLLFKDPLDRYRIA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1149 363 MobiDBLite consensus disorder prediction 129 153 - -
Lele25g1149 363 MobiDBLite consensus disorder prediction 48 68 - -
Lele25g1149 363 MobiDBLite consensus disorder prediction 129 144 - -
Lele25g1149 363 Pfam non-haem dioxygenase in morphine synthesis N-terminal 62 130 IPR026992 -
Lele25g1149 363 SUPERFAMILY Clavaminate synthase-like 44 347 - -
Lele25g1149 363 Gene3D - 40 323 IPR027443 -
Lele25g1149 363 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 9 362 - -
Lele25g1149 363 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1149 Lele-ChrLele25 7411628 7413032 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1149 25 7411628 7413032 Lele25g1159 25 7521680 7524962 CCT
Lele25g1149 25 7411628 7413032 Lele27g0921 27 17141992 17145253 CCT
Lele25g1149 25 7411628 7413032 Lele27g0931 27 17255749 17257064 hybridization
Lele25g1149 25 7411628 7413032 Lele28g1141 28 7394295 7395718 hybridization