Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1145 ATGGAAAATTTCTACTATTCTAGTTCTTCTGCTGGTTCTGGTTCTAGTAGCTGCTGCTGGTGGCCCTTGCAGGGCACAACAAACAGTAATCATCGTCTTTCTCCTTTTTCAGTGCAGACTCCATTGTTGCCTCCTCATCACATCTCTGATTCTTCATGCTCTCTTCAGTTCTGTGAGTTCCCTCATTCATGGCCTGCTGAAGATAAAGCTTCCACTGCCTCCAAAAGCCATAGCCAAGCTGAGAAACGCCGTAGAGACAGAATCAATGCTCAGCTCGCCACTCTCAGAAAACTCATCCCCAAGTCTGATAAGATGGACAAGGCAGCATTACTGGGGAGTGTGATAGAGCAAGTGAAGGATCTGAAACGAAAAGCCATGGATATAGGAACTTCCTTCACAGTTCCTACAGAGATCGATGAAGTATCAATAGACCAAGAAGAAGATGAAGAAAGCTCAACAAGCTCCATCATCAGCAACAAAGTGAAAGGAAACAACAACAACAAAAAGAAGATAGTGATCAGAGCTTCAGTTTGCTGTGAGGATCGACCAGAACTGTTCTCAGAACTCATAAAAGTTCTGAAAGGGCTGAGGTTAACAGCAGTGAAAGCTGACATGGCGAGTGTGGGAGGAAGAATTAAAAGCATATTGGTTCTGTGTTCTAAGGACAGTGACGATACTGTTTGTGTCACTACTCTGAAACAGTCTCTTAAATCTGCCGTCACTAAAATTGCTGCTGCTGCTTCTTCATCAATTGCTTCTTCTTGTCCTGCAAGAAGTAAGAGGCAGAGGTTCTTCTTGCCTTCTTCTCCTTGCCTCCATTAA 822 0.4392 MENFYYSSSSAGSGSSSCCWWPLQGTTNSNHRLSPFSVQTPLLPPHHISDSSCSLQFCEFPHSWPAEDKASTASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVIEQVKDLKRKAMDIGTSFTVPTEIDEVSIDQEEDEESSTSSIISNKVKGNNNNKKKIVIRASVCCEDRPELFSELIKVLKGLRLTAVKADMASVGGRIKSILVLCSKDSDDTVCVTTLKQSLKSAVTKIAAAASSSIASSCPARSKRQRFFLPSSPCLH 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1145 273 MobiDBLite consensus disorder prediction 66 87 - -
Lele25g1145 273 Pfam Helix-loop-helix DNA-binding domain 75 121 IPR011598 GO:0046983
Lele25g1145 273 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 121 IPR011598 GO:0046983
Lele25g1145 273 PANTHER TRANSCRIPTION FACTOR BHLH30 64 266 IPR045847 GO:0003700|GO:0006355
Lele25g1145 273 CDD ACT_UUR-ACR-like 176 211 - -
Lele25g1145 273 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 73 124 IPR036638 GO:0046983
Lele25g1145 273 Gene3D - 66 128 IPR036638 GO:0046983
Lele25g1145 273 CDD bHLH_AtAIG1_like 67 144 - -
Lele25g1145 273 SMART finulus 78 127 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1145 Lele-ChrLele25 7378472 7379500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1145 1 268 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 40.714 5.89e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele25g1145 HLH 2.4e-10 No_clan