Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1139 ATGAAGGGCTATGAGCCCCGTTCCAGTTCTTCCTGCGCCGCTTGCAAGCTCCTCAAGCGCCGCTGCACCCCCACCTGCATCTTTGCCCCTTACTTCCGCTCCGACGAGTGCAAGAAATTCGCCAAAGTCCACAAGGTCTTCGGCGCCAGCAATGTCAGCAAGATCCTCTTCGAGGTCCCAGAGGAGCAGCGCGAGGACACCGTCAACTCTCTCGCCTACGAGGCCGACGCCCGCCTCAAAGACCCCGTCTATGGATGCATTGGCGCCATCGCTCTCTTGCAGACCAAGATGGTCGAGCTCCAGCACGACCTCGCCATCGCCAGGGCTCGTCTCGCTCGCTATTCTTCCGCCTCTGCTTCTTCCGCCGCCGCCGCCGCCGCCGACGCCTTCATTAATAACTTCCCTTCTTCTGTCAACTACGATTCCTTCCCTCCAGCTCACGTGGGTCTGCCTCCTTTCCCTGACTCTTCCTCCTCTTGCTGCGACGTCGACGATGGCTTCTCGTCGTCTCAGGTTCAGTTATCGAGCCGACATGATATGGTGGACGATTTTTTCCAAACCCCATATATACTCTGA 576 0.5816 MKGYEPRSSSSCAACKLLKRRCTPTCIFAPYFRSDECKKFAKVHKVFGASNVSKILFEVPEEQREDTVNSLAYEADARLKDPVYGCIGAIALLQTKMVELQHDLAIARARLARYSSASASSAAAAAADAFINNFPSSVNYDSFPPAHVGLPPFPDSSSSCCDVDDGFSSSQVQLSSRHDMVDDFFQTPYIL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1139 191 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Lele25g1139 191 Coils Coil 90 110 - -
Lele25g1139 191 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Lele25g1139 191 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1139 Lele-ChrLele25 7343457 7344032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1139 1 153 AS2 family AT3G11090 63.636 4.97e-68 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele25g1139 LOB 2.5e-37 No_clan