Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1134 ATGGAGAGGCTGGCAGAGGTAACCGAATCGGAGATACGAATTGACTTTGCTCTCAACTGCAAATGCCGAGCCACCGTCACTCTACGATCTCTTTGCGCCGCCTCGCCTCTGGCCTTCAAGGTTCAGACCTCGTCCCCCAACAAGTTCCTCGTTAACCCTCCCTCCGGCATCATCCCTTCCCTCTCTCACGCCACCTTCCAAGTTATCCTCAAGCCTCAGTCCCAGCTTCCCCCGACCTTCCCTCGCTCGGCCTCCGATCGCTTCCTTGTCAAAATCGCCGAATTCCTCCCCGACGCTTCCAAGCCCGTTCCCTCTCACACTATTAACTCATGGTTCTCCTCTCTCCCATCCCCTGCTTCCACTCAGAATCTCAAACTCAAGGTCGCCTTCGTCGGCCCCTTCCTTCTCCGCCATGCCGTCGCGAGTGGTGATTTGGATGCTGTTAGGAACATCATCAAACGTCAGAGGCCCTTACTCGCCGATTTGTCACCCAATGAAGCCGAGTCGCTCCTCCGGGTGGCCACCGAGCTGGTTAACCCGGACGACATGGTTCACTTGCTACTGGAAGCTGGGTTGAGAGTGGCTGAGGAATTGGGACCGGGTAAAGTGGACCCGAGATGGGCTTCGAAGGGCTGGGATGAGTTACACGTGGCTGCTGCTTTTGATCGGACGGATGACGTCCTCAGGTTGTTAAAGACGAATCCGTCGTGGCAGTTGGATTCCAGAGATCACAAGGGCAGGACCCCTATGCATTTGGCGGCGGATAAGGGAAATATCAGGTGCGCGCGCTTGCTGGTGGAAGGAGGTGCGAATGTGAATGCCAGCTGTAACGACGGTCGCACGCCGTTGTACAGAGCGGCGGCGAATGGTGACCGTAGGATGGTGGAAATGCTGGTTGAGATGGGCGCTGACCCAACTATAACCGACGATCGTGGCCGTTCAGCCCTTTCCATTGCCAGCGATGAAGGACATAGAGAGATGGTGGAAATAATGGAGCAAGGAGGAGAAGTACTAGCGGCAGCGAGGCGTGGGGACGTGGAGAAACTGGAGACACTGTTGAAGAGAGGAGCGAGTGTACAGTATCGAGATCAGTATGGTTTGACGGCACTTCATGCTGCAGCCATGAAAGGGCACAGAGAGATGGTATCCAAGCTGACGGAAGCAGGGTTGGACTTGGAATGTGAGGACGAGGAAGGCCACGCGCCGCTGCATATGGCGGTGGAGAGTGGTGACCAAGAGACCATACAAGTTTTAGTGAACAAGGGCGTGAATGTAAATTCCGCCAATAAGAAGGGTGCCACCCCTCTGTACATGGCTAAAATTTTGGGATACGATGCCATAGCTGACTTTCTCGTCAGCAAGGGAGCAAGGTCCTGTTTTCCTGTAATTTTACAGTAA 1398 0.5472 MERLAEVTESEIRIDFALNCKCRATVTLRSLCAASPLAFKVQTSSPNKFLVNPPSGIIPSLSHATFQVILKPQSQLPPTFPRSASDRFLVKIAEFLPDASKPVPSHTINSWFSSLPSPASTQNLKLKVAFVGPFLLRHAVASGDLDAVRNIIKRQRPLLADLSPNEAESLLRVATELVNPDDMVHLLLEAGLRVAEELGPGKVDPRWASKGWDELHVAAAFDRTDDVLRLLKTNPSWQLDSRDHKGRTPMHLAADKGNIRCARLLVEGGANVNASCNDGRTPLYRAAANGDRRMVEMLVEMGADPTITDDRGRSALSIASDEGHREMVEIMEQGGEVLAAARRGDVEKLETLLKRGASVQYRDQYGLTALHAAAMKGHREMVSKLTEAGLDLECEDEEGHAPLHMAVESGDQETIQVLVNKGVNVNSANKKGATPLYMAKILGYDAIADFLVSKGARSCFPVILQ 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1134 465 Gene3D Immunoglobulins 2 133 IPR013783 -
Lele25g1134 465 SUPERFAMILY PapD-like 10 141 IPR008962 -
Lele25g1134 465 ProSiteProfiles Ankyrin repeat region circular profile. 245 274 - -
Lele25g1134 465 ProSiteProfiles Ankyrin repeat profile. 365 397 IPR002110 GO:0005515
Lele25g1134 465 SUPERFAMILY Ankyrin repeat 138 457 IPR036770 -
Lele25g1134 465 ProSiteProfiles Ankyrin repeat region circular profile. 278 310 - -
Lele25g1134 465 ProSiteProfiles Ankyrin repeat profile. 245 277 IPR002110 GO:0005515
Lele25g1134 465 ProSiteProfiles Ankyrin repeat profile. 398 430 IPR002110 GO:0005515
Lele25g1134 465 PANTHER ANKYRIN REPEAT CONTAINING 278 386 - -
Lele25g1134 465 Gene3D - 335 461 IPR036770 -
Lele25g1134 465 Pfam Ankyrin repeats (many copies) 246 299 IPR002110 GO:0005515
Lele25g1134 465 Gene3D - 134 334 IPR036770 -
Lele25g1134 465 PRINTS Ankyrin repeat signature 366 381 IPR002110 GO:0005515
Lele25g1134 465 PRINTS Ankyrin repeat signature 414 428 IPR002110 GO:0005515
Lele25g1134 465 SMART ANK_2a 365 394 IPR002110 GO:0005515
Lele25g1134 465 SMART ANK_2a 398 427 IPR002110 GO:0005515
Lele25g1134 465 SMART ANK_2a 431 461 IPR002110 GO:0005515
Lele25g1134 465 SMART ANK_2a 245 274 IPR002110 GO:0005515
Lele25g1134 465 SMART ANK_2a 210 240 IPR002110 GO:0005515
Lele25g1134 465 SMART ANK_2a 278 307 IPR002110 GO:0005515
Lele25g1134 465 SMART ANK_2a 311 340 IPR002110 GO:0005515
Lele25g1134 465 Pfam MSP (Major sperm protein) domain 35 101 IPR000535 -
Lele25g1134 465 ProSiteProfiles Ankyrin repeat region circular profile. 365 397 - -
Lele25g1134 465 ProSiteProfiles Ankyrin repeat region circular profile. 398 430 - -
Lele25g1134 465 Pfam Ankyrin repeats (3 copies) 340 428 IPR002110 GO:0005515
Lele25g1134 465 ProSiteProfiles Major sperm protein (MSP) domain profile. 3 129 IPR000535 -
Lele25g1134 465 ProSiteProfiles Ankyrin repeat profile. 278 310 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1134 Lele-ChrLele25 7303666 7305413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1134 215 439 Miscellaneous Gene Families AT5G02620 30.213 2.91e-19 88.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1134 25 7303666 7305413 Lele27g0945 27 17354056 17355802 hybridization