Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1133 ATGAACACCTTCCTTGGCGTAACCTTCTTCCTAATCTTCTTCTTCACCGACCCAGTCTCACCCTTCTCCCACCAAAACCACTATACTAAATCCTCCGACCTCATCTCTCTCCAGCGCCACACCCGTCCCCAAGAATACTTGGAGGTCACCTATCCCTCCGATCACGCCATCCCATCATGCTCCCACCATATCCTACGCCACTCCTTCGCCGATACGATCGATTCCCCTCCCTTCTCCACCCCCTACATCCCTCCCTCTCATTGTTCTCCTTCCCCTTGGTCCCGCGTTCTCCTCCATTTCCATGCCGATTGTAAAGGAGAGCAGTACGACCGCATCGCCGGCCTATGGCTTGGCGGCGTCGAGCTCCTTCGCACCAGCACCGCCGACCTCACCAAGGATGGTGTCTTCTGGAATGTTTGGAAGGACGTCACCAGGTACTCCTCTCTCTTTACAAGGTCTGACTTGGATCTCACGATGATGCTGGAAAACGTCGTTAATCAGGAATTCACTGGGATTTACCACGTTACCGTCACTCTTTCGTTCTTCAAAGGCCACGCTGTTGTTGGGGCTCCGATTGGGGTTTCTTGTGAGAGGAGATTGAGGACCCTTAGGGATGAATCAGATGGAGGAATCTCGGAAGTAACGGCGGAACGGGATAATCTAGGTGATACTGATGTGCGTAGTGTTTCATTGGATTTGGATGAATCCCCGGCCGATTTGATTATTCCGATATCTGATGACGGCGACCGTGGGTTTTGGTTTAGAGTTGAGCGCGAATCGGATGTGCATTCCCGGAGAATTCAAATCCCAAGAAATACTCACCATGCGGTTCTTGAGTTGTACGTGTCTTTTCATGGCAACGATGAGTTTTGGTACTCAAACCCATCCAATTCATACATAAAAAAGAACGGCTTAAGCACAGGCCGAGGTAACGGAGCTTACAGGGAAGTGTACGTGACAATCGACGGCGAAGTTGTGGGGTCAGAGATTCCATTTCCGGTCATTTTCACAGGAGGAATCAATCCCCTCTTCTGGGAGCCTATTGTTGCGATTGGGGCTTTCAATCTTCCGTCTTATGATATAGATTTAACACCTTTTCTTGGTAAGATTTTGGACGGGAAAAAACATAGATTTGGAATAGGTGTGACTCAGGGCATCTTATTCTGGCTTGTCAATGCAAATTTACACCTTTGGTTGGATCATCATTCCGAAGTAGTTCATGCTGAACGAATCATGAACAAGAGCCCTGCAGTAACAATACAGCGCCAAGAAGAATTTACAGGACTTGACGGGTCGTTTGGGATAGATGCAGAGAGGGAAACAAAAGTAGCAGGGTGGGTTTGGTCAAGTGCAGGCAACTTGACCACCATTATCTCGCAGGAATTCCAGTTCAAGAACTACATCAAGTTTCAAAAGAATGGAACCTGCAAGTTGGTGAAACAAACGCTCAAAGCAAAGAAGAAGACGAAGATAATAAATGGTAGCGGTCACGTGGTTGCATTATTGAAGATAAAGAGAAACTATCCTCTGCGTGTGATAACTCGGACGAAACCATGTTTGCGTAAGGGCAGATATCTACTTGTTACCAATGTCACTCATGCTTTGAAGGAGAAGCAATCGGGTGCGTGCTTCTCAAATTCGATTAGTAACAAACAGGATTCTTCGGGATGGATGGAAGTGAAGGGTCACTCTGTTCTATCAGGTCAAGCAATGACCAGACAAAGTTATACTTACAAAGACAGGTTCAATTGCTATTCTCGAAATGTTGCAGCAGCTAATGGCAGGATGATTGAGGACAATTCCTCTTTTCAATGCGAGGAATGA 1824 0.4709 MNTFLGVTFFLIFFFTDPVSPFSHQNHYTKSSDLISLQRHTRPQEYLEVTYPSDHAIPSCSHHILRHSFADTIDSPPFSTPYIPPSHCSPSPWSRVLLHFHADCKGEQYDRIAGLWLGGVELLRTSTADLTKDGVFWNVWKDVTRYSSLFTRSDLDLTMMLENVVNQEFTGIYHVTVTLSFFKGHAVVGAPIGVSCERRLRTLRDESDGGISEVTAERDNLGDTDVRSVSLDLDESPADLIIPISDDGDRGFWFRVERESDVHSRRIQIPRNTHHAVLELYVSFHGNDEFWYSNPSNSYIKKNGLSTGRGNGAYREVYVTIDGEVVGSEIPFPVIFTGGINPLFWEPIVAIGAFNLPSYDIDLTPFLGKILDGKKHRFGIGVTQGILFWLVNANLHLWLDHHSEVVHAERIMNKSPAVTIQRQEEFTGLDGSFGIDAERETKVAGWVWSSAGNLTTIISQEFQFKNYIKFQKNGTCKLVKQTLKAKKKTKIINGSGHVVALLKIKRNYPLRVITRTKPCLRKGRYLLVTNVTHALKEKQSGACFSNSISNKQDSSGWMEVKGHSVLSGQAMTRQSYTYKDRFNCYSRNVAAANGRMIEDNSSFQCEE 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1133 607 Pfam Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A 53 510 IPR021102 -
Lele25g1133 607 PANTHER PEPTIDE-N4-(N-ACETYL-BETA-GLUCOSAMINYL)ASPARAGINE AMIDASE A PROTEIN 22 606 IPR021102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1133 Lele-ChrLele25 7300965 7302788 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1133 25 7300965 7302788 Lele25g1142 25 7369286 7369816 CCT
Lele25g1133 25 7300965 7302788 Lele27g0937 27 17294258 17294788 CCT
Lele25g1133 25 7300965 7302788 Lele28g1135 28 7354623 7355153 CCT
Lele25g1133 25 7300965 7302788 Lele27g0946 27 17356447 17358273 hybridization
Lele25g1133 25 7300965 7302788 Lele28g1125 28 7287329 7289161 hybridization