Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1132 ATGTACGAGGCCAAGTATCCAGAAGTGGACATGGCCGTTATGATACAGGTCAAGAACATCGCCGACATGGGTGCATACGTCTCACTTCTTGAGTACAACAATATCGAAGGCATGATCTTGTTCTCCGAGCTCTCTCGCCGCCGGATTCGTAGCGTCAGCAGTCTCATTAAGGTCGGCCGCATCGAGCCCGTCATGGTTCTCAGGGTCGACAAGGAAAAGGGTTACATCGATTTGAGCAAGAGAAGGGTGTCTGAGGAGGATAACCAGGCTTGCGAGGAGAGGTACAACAAGAGCAAGCTTGTTCACTCCATCATGCGTCACGTGGCTGAGACTGAAAATATCGATTTAGAGGAGCTGTATGTTCACACCGGATGGCCTCTATATCGTAAATATGGTCATGCTTTTGAGGCATTCAAAATAATTGTTACCGATCCTGATTCAGTTTTGAATTCCCTCACCCGTGAGGTCAAGGAGGTTGGCCCTGATGGGCAGGAGGTGACCAAGGTGGTTCCAGCAGTATCAGAAGAGGTGAAGGAAGCTCTAGTAAAGAACATCAGAAGAAGAATGACCCCCCAGCCCTTGAAAATTAGGGCAGATATTGAAATGAAGTGTTTTCAGTTTGATGGAGTTCTTCACATTAAGGAAGCAATGCGGAAAGCTGAAGCTGCTGGAAATAATGTTTGCCCAGTGAAGATTAAACTTGTTGCTCCTCCACTTTATGTTCTTACCACTCAGACTCTTGACAAGGAGCAAGGAATATTGGTACTCAAAGATGCTATTGAGGCCTGCACTAAAGCCATAGAGCAACACAAAGGCAAACTAGTTGTGAAGGAGCAACCCAGAGCAGTGAGTGAACGTGATGATAAATTGCTTGCTGAACACATGGCTAAGCTACGCCAAGATAACGAGGAGATCAGTGGTGATGAAGATAGTGAAGAGGAAGAAGATACAGGAATGGGAGAAGTTGATGTGGACCAGGGTGCTGGCATAACAGAGTGA 999 0.4665 MYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDNQACEERYNKSKLVHSIMRHVAETENIDLEELYVHTGWPLYRKYGHAFEAFKIIVTDPDSVLNSLTREVKEVGPDGQEVTKVVPAVSEEVKEALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAAGNNVCPVKIKLVAPPLYVLTTQTLDKEQGILVLKDAIEACTKAIEQHKGKLVVKEQPRAVSERDDKLLAEHMAKLRQDNEEISGDEDSEEEEDTGMGEVDVDQGAGITE 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1132 332 FunFam Eukaryotic translation initiation factor 2 subunit alpha 84 188 - -
Lele25g1132 332 MobiDBLite consensus disorder prediction 305 321 - -
Lele25g1132 332 CDD S1_IF2_alpha 7 82 IPR044126 GO:0003723
Lele25g1132 332 SUPERFAMILY eIF2alpha middle domain-like 83 188 IPR024054 -
Lele25g1132 332 Pfam S1 RNA binding domain 7 81 IPR003029 GO:0003676
Lele25g1132 332 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 1 322 IPR011488 GO:0003723|GO:0003743
Lele25g1132 332 FunFam Eukaryotic translation initiation factor 2 subunit alpha 1 83 - -
Lele25g1132 332 SUPERFAMILY eIF-2-alpha, C-terminal domain 192 308 IPR024055 -
Lele25g1132 332 Gene3D - 1 83 IPR012340 -
Lele25g1132 332 FunFam Eukaryotic translation initiation factor 2 subunit 1 194 316 - -
Lele25g1132 332 Pfam Eukaryotic translation initiation factor 2 alpha subunit 119 249 IPR011488 GO:0003723|GO:0003743
Lele25g1132 332 SMART S1_6 8 81 IPR022967 -
Lele25g1132 332 Coils Coil 295 315 - -
Lele25g1132 332 Gene3D EIF_2_alpha 194 316 IPR024055 -
Lele25g1132 332 ProSiteProfiles S1 domain profile. 10 81 IPR003029 GO:0003676
Lele25g1132 332 MobiDBLite consensus disorder prediction 295 332 - -
Lele25g1132 332 SUPERFAMILY Nucleic acid-binding proteins 4 86 IPR012340 -
Lele25g1132 332 Gene3D Translation initiation factor 2; subunit 1; domain 2 84 187 IPR024054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1132 Lele-ChrLele25 7296743 7300274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1132 1 332 Eukaryotic Initiation Factors Gene Family AT5G05470 81.081 0.0 518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1132 25 7296743 7300274 Lele26g1132 26 7289785 7296481 ECH
Lele25g1132 25 7296743 7300274 Lele25g1132 25 7296743 7300274 ECH
Lele25g1132 25 7296743 7300274 Lele27g0947 27 17358848 17363025 hybridization
Lele25g1132 25 7296743 7300274 Lele28g1124 28 7282549 7286446 hybridization