Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1131 ATGGGAGGCAATTCGCCTTGTGCTTCATGCAAGTTACTTCGACGCCGTTGTGCCAAAGATTGCATCTTTGCTCCTTATTTCCCTTCCGATGACCCTCAGAAGTTCGCCATCGTTCACAAGGTCTTCGGCGCTAGCAACGTCGGCAAAATGCTGCAGGAGCTTCCAGTTCAACAGAGAACAGACGCAGTGAGCAGCTTAGTGTATGAAGCCAATGCAAGAGTTCGAGACCCAGTTTATGGTTGTGTTGGTGCCATATCGTACCTGCAGAATCAAGTTTCAGAGCTTCAAATGCAGCTCGCAGTGGCTCAAGCAGAGATCCTCTGCATCCAGATGCAGCAGGAGCCGGAGCCGGAGCCGGAGCCGGAGCCGGTAGTCGTGCAAAACCCGGAATTTGACCCGAATCAGAAACCTTATTTTCTCCAAAACGACCAGTACCTTAACTTTGCTTCTTCAAGCAATAATGTAATTCAGGATTCTCTTCAGAGAGAGAGCTTCTTCGGACACGACATGGTTTCTTAA 519 0.4933 MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPQKFAIVHKVFGASNVGKMLQELPVQQRTDAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQQEPEPEPEPEPVVVQNPEFDPNQKPYFLQNDQYLNFASSSNNVIQDSLQRESFFGHDMVS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1131 172 Coils Coil 85 105 - -
Lele25g1131 172 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Lele25g1131 172 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 128 - -
Lele25g1131 172 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1131 Lele-ChrLele25 7290034 7290660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1131 3 140 AS2 family AT2G30130 77.536 3.11e-73 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele25g1131 LOB 2e-42 No_clan