Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele25g1128 | ATGCCTTCTTCTTCCCTTCAACTCCACCTCCCCTTCAATCCCGGCACAGCCTTGGACTGCCCCAAGCAGCCCCCGCCGCTCCCCACGCGCCGCCTTGTCGTTCCTCTCTCCTCTTCCAAGCTTGATCTTCCTCCGGTTCCCGACTCGGTCCTTTTCCAGCACGCGCACGAGGTGGGGCCCGGACAGTGCTGCTCCGTCGTGATCCAGTCCATCCACGCGCCCGTCTCCACCGTCTGGTCCGTGGTTCGCCGCTTTGATAACCCCCAGGCGTATAAGCATTTTTTGAAGAGCTGCCACGTCATCGACGGAGATGGCCGCGGCATTCACGTCGGCGCCGTACGAGAGGTCCACGTGGTGTCCGGCCTTCCCGCCGTGTCCAGCACCGAGCGGTTGGAGATCCTTGACGATGAGCGCCACGTCATCAGCTTCAGCGTCGTCGGAGGAGACCACCGCTTGAGCAACTACCGGTCGATCACGACCTTGCACGCGCATGGAAACGAGACGGAGGTCATCGAGTCGTACGTCGTCGATGTGCCTCAGGGAAACACGAAGGAAGAGACGTGCGTGTTCGTCGACACGATCGTGCGGTGCAACTTGCAATCCTTGGCACAGATCGCAGAGAACATGACCAGAAGGGCCCAGGAACAGCCATTATCACCGTAA | 663 | 0.6078 | MPSSSLQLHLPFNPGTALDCPKQPPPLPTRRLVVPLSSSKLDLPPVPDSVLFQHAHEVGPGQCCSVVIQSIHAPVSTVWSVVRRFDNPQAYKHFLKSCHVIDGDGRGIHVGAVREVHVVSGLPAVSSTERLEILDDERHVISFSVVGGDHRLSNYRSITTLHAHGNETEVIESYVVDVPQGNTKEETCVFVDTIVRCNLQSLAQIAENMTRRAQEQPLSP | 220 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele25g1128 | 220 | CDD | PYR_PYL_RCAR_like | 63 | 207 | - | - | |
| Lele25g1128 | 220 | FunFam | Abscisic acid receptor PYL4 | 30 | 218 | - | - | |
| Lele25g1128 | 220 | Gene3D | - | 34 | 220 | IPR023393 | - | |
| Lele25g1128 | 220 | Pfam | Polyketide cyclase / dehydrase and lipid transport | 69 | 207 | IPR019587 | - | |
| Lele25g1128 | 220 | SUPERFAMILY | Bet v1-like | 63 | 205 | - | - | |
| Lele25g1128 | 220 | PANTHER | - | 62 | 207 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele25g1128 | Lele-ChrLele25 | 7271534 | 7272196 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele25g1128 | 25 | 7271534 | 7272196 | Lele25g1128 | 25 | 7271534 | 7272196 | CCT | |
| Lele25g1128 | 25 | 7271534 | 7272196 | Lele27g0951 | 27 | 17386077 | 17386739 | CCT | |
| Lele26g1113 | 26 | 7186322 | 7186621 | Lele25g1128 | 25 | 7271534 | 7272196 | CCT | |
| Lele27g0965 | 27 | 17469173 | 17470726 | Lele25g1128 | 25 | 7271534 | 7272196 | CCT | |
| Lele25g1128 | 25 | 7271534 | 7272196 | Lele25g1128 | 25 | 7271534 | 7272196 | ECH | |
| Lele25g1128 | 25 | 7271534 | 7272196 | Lele27g0951 | 27 | 17386077 | 17386739 | hybridization |