Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1121 ATGGAGAAGAGAAATGCAGCAGATTGGCACTATATTTTGGAGAAGAAGAGAGAGAAATGGAAGTTTCAATGGCTTCCCTGGATCCTTTGTTTGTGGATTCTTGTGCTGTCCATTTGTTTGAAGCCAGTTTTGGGTGAAGGAGATCGTTGGGATGGAGTGGTTGTCACAGAATCAAATTTCTTGGCACTTCAAGCGTTCAAGCAAGAGTTGATTGATCCCAAAGGCTTCTTGAGAAGCTGGAATGACAGTGGTTTCACTACTTGTTCTGGAGGTTGGGCTGGAATCAAGTGTGCTCAGGGTCAGGTTATCGTGATCCAGCTTCCATGGAAGGGACTGAAAGGTCACATCACAGAGAGGATAGGTCAACTTGAAGGCCTTCGAAAGCTAAGTCTTCATGATAACCAAATTGGTGGCTCGATCCCTTCTTCATTGGGACTCCTTCCTAATCTCAGAGGGGTTCAGCTATTCAACAATCGTCTGGAAGGTTCCATCCCTCCTTCATTAGGTTCTTGCCTTTTGCTTCAGTCCTTAGACTTAAGTAATAACTTACTCTCAGGGAGAATCCCTGATAGCCTATTCAATTCTTCTAAGCTTTATTGGCTTAATTTGAGCTTTAATTCCTTCTCTGGTTCAATACCAGCTTCCCTTACTCGCTCACCTTCTCTCACCTTCGTTTCTCTTCAACACAATAATCTCTCTAGCTCTATCCCCAACTCATGGGGTGGGACTCTTTCTAGACTTCAAACGTTAGATTTTTCAAATAATGCCCTGAACGGAAGTTTGCCTGCTAGTCTCTCTAATTTGTCCTCGCTTACTGTGTTGAATGTTGAGAACAACCACCTCTATGACCAAATCCCAGAATCTCTAGGTAGATTACGTAATCTTTCTGTTCTTAGTTTGAGGGGAAATCAACTTAGTGGTCACATCCCTGAAAGTGTTGGCAACGTTTCCTCCCTTAAACAGCTTGATTTGTCACTGAATAATCTCAGTGGTGAAATCCCATCCTCATTTGACTATTTACGTGGCCTTGATTTCTTCAATGTTTCTTACAATAACCTGTCTGGTCCGGTTCCTTCTCTACTTGCCCAAAAATTTAACTCAAGCTCGTTTTTGGGTAATATTCAACTCTGTGGGTACGATCCTTCAATCCCATGTCCTTCTCCAGCACCATCCGACGTTGTCTCTGCTCCATCCTCTGGAACATCGAAACACCATCATCGTCGGAAACTACATGCTAAAGACATAATTCTCATAGCAGCTGGGGCTCTCCTTGTACTCCTCGTAATAATATGTTGCATTCTGGTCTTCTTCTTGATCAGAAGAAGAGCAACATCGAGAGCAGAGAAAAAGGCAAGCGCTGGCACTACTGGAACCGAAAAAGGGGTTGCTTCAGCCGCCGCCGCCGCTGCCGGAGCAGCTGAGGCCGCCGCCGGCGAGGCAGGAGGGAAACTAGTCCATTTTGATGGCCCGACAGCCTTTACAGCCGATGATCTTCTGTGTGCAACCGCGGAGATAATGGGAAAGAGCACCTACGGAACAGTATACAAAGCCACATTGGAGGATGCAAGTGAGGTTGCAGTGAAGAGACTGAGAGAAAAGATCACAAAGGGCCAGAGAGAATTTGAATCTGAGGTTAACATTCTTGGGAAAATTCGCCACCCAAATCTTTTGGCACTGAGGGCATATTATCTGGGACCCAAGGGGGAAAAGCTTCTGGTTTTTGATTATATGCCCAGAGGAAGTCTTGCTGCTTTCCTACACGCTCTGGGGCCAGAAACAGCCATTGATTGGCCAACAAGGATGAGAATAGCACAAGGCATGGCTCGTGGCTTGTTCTACCTTCATTCCCATGAGAACATCATACATGGGAACCTTACATCCAGCAACGTCCTGCTGGACCAAAACATAAATGCTAAAATCGCAGATTTTGGTCTTTCTAGGTTAATGACAACCGCTGCTAGTTCTAACGTGATCGCCACCGCTGGAGCTTTAGGCTACCGAGCGCCGGAGCTCTCGAAGCTGAAGAAAGCAAACACAAAAACTGATGTATACAGCCTGGGTGTGATCTTGTTGGAACTCCTAACAGGGAAATCACCTGGTGACGCCATGAATGGGGTGGATTTGCCACAGTGGGTTGCCTCCATTGTGAAAGAAGAATGGACGAATGAAGTATTCGACGTGGAGCTCATGAGAGATGCATCTACCATTGGTGATGAGTTGTTGAACACATTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGTTCAGCAAGTACTACATCAATTAGAAGCGATTAGACCAGAGAGATCAGCAAGTTCTGGGGATGATGGAGCCGTTGTAGTAGGAGGAACTTAG 2373 0.4576 MEKRNAADWHYILEKKREKWKFQWLPWILCLWILVLSICLKPVLGEGDRWDGVVVTESNFLALQAFKQELIDPKGFLRSWNDSGFTTCSGGWAGIKCAQGQVIVIQLPWKGLKGHITERIGQLEGLRKLSLHDNQIGGSIPSSLGLLPNLRGVQLFNNRLEGSIPPSLGSCLLLQSLDLSNNLLSGRIPDSLFNSSKLYWLNLSFNSFSGSIPASLTRSPSLTFVSLQHNNLSSSIPNSWGGTLSRLQTLDFSNNALNGSLPASLSNLSSLTVLNVENNHLYDQIPESLGRLRNLSVLSLRGNQLSGHIPESVGNVSSLKQLDLSLNNLSGEIPSSFDYLRGLDFFNVSYNNLSGPVPSLLAQKFNSSSFLGNIQLCGYDPSIPCPSPAPSDVVSAPSSGTSKHHHRRKLHAKDIILIAAGALLVLLVIICCILVFFLIRRRATSRAEKKASAGTTGTEKGVASAAAAAAGAAEAAAGEAGGKLVHFDGPTAFTADDLLCATAEIMGKSTYGTVYKATLEDASEVAVKRLREKITKGQREFESEVNILGKIRHPNLLALRAYYLGPKGEKLLVFDYMPRGSLAAFLHALGPETAIDWPTRMRIAQGMARGLFYLHSHENIIHGNLTSSNVLLDQNINAKIADFGLSRLMTTAASSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKSPGDAMNGVDLPQWVASIVKEEWTNEVFDVELMRDASTIGDELLNTLKLALHCVDPSPSARPEVQQVLHQLEAIRPERSASSGDDGAVVVGGT 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1121 790 Pfam Leucine rich repeat N-terminal domain 61 97 IPR013210 -
Lele25g1121 790 Pfam Leucine rich repeat 220 281 IPR001611 GO:0005515
Lele25g1121 790 Pfam Leucine rich repeat 293 353 IPR001611 GO:0005515
Lele25g1121 790 Gene3D Ribonuclease Inhibitor 175 283 IPR032675 -
Lele25g1121 790 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 96 388 - -
Lele25g1121 790 ProSiteProfiles Protein kinase domain profile. 500 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1121 790 SUPERFAMILY L domain-like 102 379 - -
Lele25g1121 790 FunFam Pollen receptor-like kinase 1 577 782 - -
Lele25g1121 790 CDD STKc_IRAK 506 771 - -
Lele25g1121 790 SUPERFAMILY Protein kinase-like (PK-like) 504 772 IPR011009 -
Lele25g1121 790 Pfam Leucine Rich Repeat 174 192 IPR001611 GO:0005515
Lele25g1121 790 Pfam Protein tyrosine and serine/threonine kinase 503 768 IPR001245 GO:0004672|GO:0006468
Lele25g1121 790 Gene3D Phosphorylase Kinase; domain 1 506 577 - -
Lele25g1121 790 PRINTS Leucine-rich repeat signature 174 187 - -
Lele25g1121 790 PRINTS Leucine-rich repeat signature 244 257 - -
Lele25g1121 790 Gene3D Ribonuclease Inhibitor 59 174 IPR032675 -
Lele25g1121 790 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 184 771 - -
Lele25g1121 790 Gene3D Transferase(Phosphotransferase) domain 1 578 784 - -
Lele25g1121 790 FunFam Leucine-rich repeat receptor-like protein kinase 486 576 - -
Lele25g1121 790 Gene3D Ribonuclease Inhibitor 284 385 IPR032675 -
Lele25g1121 790 SMART LRR_typ_2 174 195 IPR003591 -
Lele25g1121 790 SMART LRR_typ_2 268 291 IPR003591 -
Lele25g1121 790 SMART LRR_typ_2 123 146 IPR003591 -
Lele25g1121 790 SMART LRR_typ_2 147 171 IPR003591 -
Lele25g1121 790 SMART LRR_typ_2 244 267 IPR003591 -
Lele25g1121 790 SMART LRR_typ_2 292 316 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1121 Lele-ChrLele25 7233032 7235496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1121 50 773 Receptor kinase-like Gene Family AT3G51740 62.145 0.0 903
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele25g1121 PK_Tyr_Ser-Thr 4.2e-43 CL0016