Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1104 ATGTCAGTTCATTCATGGGTTTCTGAACACAAGCTCGCTTCCATTGGGGCAGTATGGGCCACAGGAATAGGGGCATCCTTCCTGGCTAATTCACGCAAAACCTCTGCTCCTTCTATGAAACCAAGTCTCAGACTTATTCATGCCAGAATGCATGCTCAGGCTTTAACACTGGCCGTGCTCTCTGGTGCTGCCGCTTATCACTACTATGAGAAGAATCGTCTTTCTTCTGATGCTCAATCCCCAAAACCACAGTCGGAGACTACTCGTGCTGATATCAGAAATTTGGTTGAGTGGGAGCTCCTTTCTCCTTTCTAA 315 0.473 MSVHSWVSEHKLASIGAVWATGIGASFLANSRKTSAPSMKPSLRLIHARMHAQALTLAVLSGAAAYHYYEKNRLSSDAQSPKPQSETTRADIRNLVEWELLSPF 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1104 104 Gene3D - 12 74 - -
Lele25g1104 104 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 2 82 IPR040153 -
Lele25g1104 104 ProSiteProfiles HIG1 domain profile. 1 78 IPR007667 -
Lele25g1104 104 Pfam Hypoxia induced protein conserved region 9 62 IPR007667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1104 Lele-ChrLele25 7149221 7149722 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1104 26 7144459 7145464 Lele25g1104 25 7149221 7149722 CCT
Lele27g0972 27 17508177 17509198 Lele25g1104 25 7149221 7149722 CCT
Lele28g1098 28 7129832 7130828 Lele25g1104 25 7149221 7149722 CCT
Lele25g1104 25 7149221 7149722 Lele25g1104 25 7149221 7149722 CCT
Lele25g1104 25 7149221 7149722 Lele27g0973 27 17511262 17511763 CCT
Lele25g1104 25 7149221 7149722 Lele28g1097 28 7127064 7127567 CCT
Lele25g1104 25 7149221 7149722 Lele25g1104 25 7149221 7149722 ECH
Lele25g1104 25 7149221 7149722 Lele27g0973 27 17511262 17511763 hybridization
Lele25g1104 25 7149221 7149722 Lele28g1097 28 7127064 7127567 hybridization