Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1087 ATGGATTTGCTGAACTCATCTCCATATAGAGAATTTGTGCAGCAGACATTCAAGAGAAGGAACGGCGGACGCAATAAGCATGGGCGTGGACATGTTAAATTTATTCGATGCTCCAACTGTGGTAAATGCTGTCCCAAGGACAAGTCAATCAAGAGGTTCCTTGTGAGGAACATTGTTGAGCAAGCCGCTGTTAGGGATGTTCAGGAAGCGTGTGTCTATGAACAATACACGCTCCCCAAGCTGTATGTTAAGATGCAGTACTGTGTTTCATGTGCTATTCATTCGCATGTTGTGAGAGTTCGTTCTCGTACTGATAGGAGGAACCGTGAGCCACCACAGCGCTTCATCAGGCGCAGGGATGATGCACCAAGACCTGGTCAACCTGGTCAAGCACCAAGACCTGCTGGAGCAGCTCCTGCTCGTACTTAA 429 0.4802 MDLLNSSPYREFVQQTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFIRRRDDAPRPGQPGQAPRPAGAAPART 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1087 142 ProSitePatterns Ribosomal protein S26e signature. 87 94 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lele25g1087 142 MobiDBLite consensus disorder prediction 103 124 - -
Lele25g1087 142 FunFam 40S ribosomal protein S26 15 128 - -
Lele25g1087 142 Gene3D Ribosomal protein S26e 15 128 IPR038551 -
Lele25g1087 142 Pfam Ribosomal protein S26e 16 120 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lele25g1087 142 MobiDBLite consensus disorder prediction 100 142 - -
Lele25g1087 142 PANTHER 40S RIBOSOMAL PROTEIN S26 16 138 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1087 Lele-ChrLele25 7024597 7028069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1087 16 130 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 83.478 2.21e-68 201