LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele25g1078	ATGGATCCTGAATATGGCAAGTGTTGGGACTCCTCAAAGAAGAATTCTTGGAAGACTATTATGCTCTTGGCCTACCAAAGCCTTGGTGTGGTTTATGGGGATTTGAGCATTTCTCCGTTATATGTTTACAAGAGTACATTTGCGGAAGACATTCAACACTCGGAGACAAATGAAGAAATTTTTGGAGCTCTTTCTTTTGTCTTCTGGACTCTGACATTGGTGCCACTATTCAAGTATGTGTTTGTGGTTCTTCGAGCTGATGATAACGGAGAAGGCGGTACCTTTGCCCTATATTCCTTGATTTGCAGGCATGCCAAAGTTAGCCTTCTACCCAACAGGCAGATTGCTGATGAAGCGCTGTCTACTTATATAATGGAGCAGCCTCCTGAGAGAAACAGTTCTAGAGTGAAAAAACTACTTGAGAAGTACAAGGCACTGCACACGGCTCTGCTAATTGTGGTTCTTCTTGGCACCTGTATGGTAATTGGGGATGGACTTCTTACTCCAGCCATTTCTGTTTTCTCGGCTGTTTCTGGTCTTGAGGTATCCATGTCCAAGAAACACCACCAGTATGCTGTCATCCCCATCACTTGTTTCATACTGGTGTGTTTATTTGCACTTCAGCACTATGGTACACACAGAGTGGGATTCCTCTTTGCACCAATTGTGCTGACATGGCTCCTATGCATCAGTACACTTGGCTTATATAATATATTCAAATGGAATCCTCATGTATATAAAGCCCTTTCACCATACTACATGTTCAGATTTTTGAAGAAGACGAGGATAAGTGGATGGATGTCTTTGGGCGGAATACTGCTGTGCATAACAGGCTCGGAAGCTATGTTTGCTGATCTTGGGCATTTCTCATATGCGGCCATTCAGATTGCATTCACCTTTCTGGTATATCCTGCACTTATATTGGCATATATGGGTCAAGCTGCCTACCTGTCATATCATCATCATCCCAGTCACGAGATCAGTTTCTATGTCTCAGTTCCAGATAAGGTGAGGTGGCCAGTGCTTGTGTTGGCCATTTTAGCTTCTGTTGTGGGAAGCCAAGCAATCATCAGTGGAACGTTTTCCATCATAAATCAGAGCCAGTCGCTTGGTTGCTTCCCAAGAGTGAAGGTTGTTCATACATCCGACAAGATACATGGCCAGATCTACATACCAGAAATCAATTGGATCCTAATGATCCTATGTATCGCAGTGACCATCGGATTCAGGGATACAAAACACATGGGAAATGCATCTGGGCTAGCAGTCATGACTGTGATGCTAGTGACGACATGCCTGACCTCCTTGGTGATTGTAGTTTGTTGGCATAAACCCCCAATCATAGCTCTCTGCTTCCTGCTGTTTTTCGGTTCTGTTGAGCTGTTATATTTCTCGGCTTCGCTGACAAAGTTCCGGGAGGGTGCGTGGCTTCCTATCCTCCTTGCCCTCTTCCTTATGACCATAATGCTGGTTTGGCACTATGCAACCATCAAGAAATATGAATTTGACCTCCACAACAAGGTTTCCCTAGAGTGGCTGTTAGCCTTGGGTCCGAGCTTGGGAATTGCTCGTGTGCCCGGAATAGGCCTAGTGTTCACTGATCTGACATCTGGCATCCCGGCTAACTTCTCCCGCTTCGTCACCAACCTCCCTGCATTCCACCGCGTCCTTGTCTTTGTATGCATAAAATCAGTTCCAGTCCCTCATGTCCCTTCCGCAGAAAGGTACCTTGTTGGCCGGGTAGGACCAGCCAATCATCGGTCCTATCGGTGCATAGTGAGATATGGATACCGCGATGTTCATCAGGATGTTGACTCCTTTGAATCTGAACTAGTACAAAAGTTAGCTGACTTCATCCGCTATGATTGGTACCGGCCACGAGTATCCAACATAAGCACCGAGGACGATGGTTCAAACTCCAACGAGTCAGGAAGTCACAGATTAACAGTGATAGGAACAATTGGATTCTCCAGGATGCCAGCTTATGAGATTGAGGAGACAGTGCAGCCAGCAAGCGTATCTGTGGGGTTCCCAACCGTAGAAAGCGTGGCAGACGTCATAGAGATGGAACCGATGAGTGTGACTCAAAGAAGAGTAAGATTTGCCATTGATGATGAGAACGGGACGAAGGGTGAGATAGGAGTGGAAATGCAAGAAGAAATGGAAGATTTATACAATGCTCAGCAAGCGGGGACAGCATTTATATTAGGGCATTCCCATGTGAGAGCAAAGCAAGGGTCGTCTCTGATAAAGAGGATGGCTGTGAACTATGGCTACAATTTCCTGAGAAGGAACTGTAGAGGCCCTGACGTGGCGCTTAAGGTTCCGCCAGTGTCTCTCTTGGAGGTTGGCATGGTTTATGTGGTGTAG	2370	0.4599	MDPEYGKCWDSSKKNSWKTIMLLAYQSLGVVYGDLSISPLYVYKSTFAEDIQHSETNEEIFGALSFVFWTLTLVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQIADEALSTYIMEQPPERNSSRVKKLLEKYKALHTALLIVVLLGTCMVIGDGLLTPAISVFSAVSGLEVSMSKKHHQYAVIPITCFILVCLFALQHYGTHRVGFLFAPIVLTWLLCISTLGLYNIFKWNPHVYKALSPYYMFRFLKKTRISGWMSLGGILLCITGSEAMFADLGHFSYAAIQIAFTFLVYPALILAYMGQAAYLSYHHHPSHEISFYVSVPDKVRWPVLVLAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWILMILCIAVTIGFRDTKHMGNASGLAVMTVMLVTTCLTSLVIVVCWHKPPIIALCFLLFFGSVELLYFSASLTKFREGAWLPILLALFLMTIMLVWHYATIKKYEFDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRVLVFVCIKSVPVPHVPSAERYLVGRVGPANHRSYRCIVRYGYRDVHQDVDSFESELVQKLADFIRYDWYRPRVSNISTEDDGSNSNESGSHRLTVIGTIGFSRMPAYEIEETVQPASVSVGFPTVESVADVIEMEPMSVTQRRVRFAIDDENGTKGEIGVEMQEEMEDLYNAQQAGTAFILGHSHVRAKQGSSLIKRMAVNYGYNFLRRNCRGPDVALKVPPVSLLEVGMVYVV	789

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele25g1078	789	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	13	787	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele25g1078	789	Pfam	K+ potassium transporter	25	599	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele25g1078	789	TIGRFAM	kup: potassium uptake protein	23	788	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele25g1078	Lele-ChrLele25	6981661	6985861	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele25g1078	1	789	Inorganic Solute Cotransporters	AT2G40540	80.473	0.0	1307