Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1063 ATGGCTTCTTCTACTTCTTCCTCTTCCGCATCAAATTGGGCCATGGAAAATGGAGTTATGCCCCATGTTTTAGCTGTTGATGACAACCTCATTGACCGCAAACTCGTTGAGAAGCTCCTCAGAAATTCTTCATGCAAAGTGACAACTGCAGAAAATGGACCAAGGGCATTGGAGCTTCTGGGGTTGGCAAGTGATGAAGAAAACACCATGAAGGGCACTGGATCCAAAGTGAATATGATTATCACAGACTATTGTATGCCTGGGATGACAGGATATGAGCTACTGAAGAAAATAAAGAAATCATCAATCATGAAGGAGGTTCCGGTGGTGATCATGTCATCTGAGAACATCCCCACTAGGGTGAACAAGTGTTTGGAGGAAGGTGCTCAGATGTTCATCCTAAAGCCCCTCAAACAATCTGATGTAAAGAAGCTGACATGTCAACTGATGAATTGCAAAGGCTAG 465 0.4366 MASSTSSSSASNWAMENGVMPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLASDEENTMKGTGSKVNMIITDYCMPGMTGYELLKKIKKSSIMKEVPVVIMSSENIPTRVNKCLEEGAQMFILKPLKQSDVKKLTCQLMNCKG 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1063 154 CDD REC_typeA_ARR 23 145 - -
Lele25g1063 154 Gene3D - 19 153 - -
Lele25g1063 154 PANTHER TWO-COMPONENT RESPONSE REGULATOR 21 149 IPR045279 GO:0009736
Lele25g1063 154 Pfam Response regulator receiver domain 23 144 IPR001789 GO:0000160
Lele25g1063 154 ProSiteProfiles Response regulatory domain profile. 22 150 IPR001789 GO:0000160
Lele25g1063 154 FunFam Two-component response regulator ORR5 21 152 - -
Lele25g1063 154 SUPERFAMILY CheY-like 20 150 IPR011006 -
Lele25g1063 154 SMART REC_2 21 146 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1063 Lele-ChrLele25 6897013 6897905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1063 22 153 Response Regulator Gene Family AT3G56380 71.429 2.65e-64 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele25g1063 Response_reg 1.9e-22 CL0304