Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1061 ATGGACACTGATGTTACTTGTTTGATTCAGAGGGCCTGTGAATTAACCAGACACCTTGAATCGAACCTTCCCAGCGAGTCTTCTAATTCGGTGTTGAGTTGCATTGATGAGATCGTGGCGAAACTAAATGCAGCTAAAGGGCGGTTGTTGTTGGTGTCGCCGCCGCCTCGTGACGATGCTGCCGCGAAGCAGGAAATCACACAGCAGCAGCAGCAGCAGCCGCCTCCAATGGCGGCTTCATCGTTATTGCAACAATGGCTATCTGTGAGTCATCAGTTTGTCCAAATGCCGCAACTTCAAGCTCCGGCGAGAATTCCAGCGCCACCCAGAGGTACCCTGCAGGCCATGACTGACTTAGATGTTTCTGCAGAAGTTGATGCTGAAGCTTCTCCTTCTCGACGCCGAAAAAGGAAGGATGATGTGGAGAAGAGGACATTGACGGTTCCAGCAGTTCAGTTTGGGAACACAGATGTGCCACCAGAGGATGGCTACACCTGGAGAAAATATGGCCAAAAGGAGATCCTTGGCTCTAATTACCCCAGGAGTTACTTCAGATGCACGCACCAGAAATTATATGAATGTCCAGCGAAGAAACAAGTGCAGCGTCTGGATAATAATCCTAACATATTTGCAGTGACATATAGAGGTAGCCACACGTGCCACATGTCGTCCACTGCTCCATCTTCATCTGTTCCACCACAACTCATAATCTCACAACACTCACAACATGACATCACACACATTAGTGCCACTACCACTACTTCCTCCCAATTGTCTCCTTCTTCTACTTCAGTTTCTGCTGGTTTGTTGTCTTCTGTTGTCCACCCCGGCCTCCTTGCCAGTGGCGGTGTGGCTCCGGCCGGTGCAGTGGCTGGCGGCGCTGGCGCCCATCCCTCCACGTCAAGCTTTGGAGCTGATTACCCGGTGTTAGATATGGCTGATGCCATGTTTAATTCAGGTTCTAGCAGTGGTAATACTAGCATGGAGTCCCTCTTTGCATCTGCTGATGAGAAATGGGAAGCAGGCGACAACAAGAAAAGCTAA 1044 0.5 MDTDVTCLIQRACELTRHLESNLPSESSNSVLSCIDEIVAKLNAAKGRLLLVSPPPRDDAAAKQEITQQQQQQPPPMAASSLLQQWLSVSHQFVQMPQLQAPARIPAPPRGTLQAMTDLDVSAEVDAEASPSRRRKRKDDVEKRTLTVPAVQFGNTDVPPEDGYTWRKYGQKEILGSNYPRSYFRCTHQKLYECPAKKQVQRLDNNPNIFAVTYRGSHTCHMSSTAPSSSVPPQLIISQHSQHDITHISATTTTSSQLSPSSTSVSAGLLSSVVHPGLLASGGVAPAGAVAGGAGAHPSTSSFGADYPVLDMADAMFNSGSSSGNTSMESLFASADEKWEAGDNKKS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1061 347 MobiDBLite consensus disorder prediction 63 79 - -
Lele25g1061 347 Pfam WRKY DNA -binding domain 161 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele25g1061 347 Gene3D WRKY domain 146 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele25g1061 347 MobiDBLite consensus disorder prediction 53 79 - -
Lele25g1061 347 MobiDBLite consensus disorder prediction 124 143 - -
Lele25g1061 347 MobiDBLite consensus disorder prediction 127 143 - -
Lele25g1061 347 SMART WRKY_cls 160 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele25g1061 347 SUPERFAMILY WRKY DNA-binding domain 157 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele25g1061 347 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 33 262 IPR044810 GO:0003700
Lele25g1061 347 ProSiteProfiles WRKY domain profile. 161 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1061 Lele-ChrLele25 6871880 6874404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1061 4 241 WRKY Transcription Factor Family AT2G40740 41.270 1.09e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele25g1061 WRKY 1.1e-26 CL0274