Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1060 ATGGCCACTGTTTCCCCAGAAGGTAGCTTCTTGCTCTCGCCCAGGAAGAAGAAGATAGATGTGATCGGAGAGCTCCTCCAAGGTTACGAGTCTGCTTCCCGGCTTAAGTTTCTGCTTCAGAAGCCTTTTGAGGATGATTGCCCTCTTTCTGCTCATCAACATTTGGCCATAGTTCTTAGATCTTTCACCCACTCTCTCTCTCTTCTCACTTCTCCCTCATCTGACGTTGCTCAGAATCTGGTGGTTTCTAGTGAGAATGAGCCGCCGACTCCTGACTACTGCCTTGACCGGAAGTCACCCGATGCGAGCGAGACTAGAGGTAGATCGGCGCCGGCCAACAAGAATCGGAGAGGTTGCTACAAAAGAAGGAGTTACATGAGGTGTACTCGCAAGTATGAACAAGGTTGTCGGGCAGTGAAGCAAGTGCAGCGAATCCAAGAGAAACCTGAACTCTATCAGATTACGTACATCGGATATCACACGTGTAAAGACCTCCTCAAGACACCCCAAGTGGTCACAGATTCTGGTAATAACTGGGAATCATTCTTCGCAGCAGATTCAAAGAATATTCCATCAAACGAAGTAAATAACAAGGTGCATCATCCCATAATAAAACAAGAGCATCATCATCATCGTCCCAAAGAGGAGACACCGGGTGATGATTTCACTGACAGCAGCTTGGACCCTAGTTTGTGGTCGGATCTCAAGGATCTGTCCGAGGCTGCCATGGTTCCTTTGGGTTGTTCTGATAATAATAATGCAGATACTGTGTATTCATGTTGTTCTGGATCTTTGGATTTCGGAGTTGATGATTCTGTTCATTTCGGCTCTGATGATTTCCACTTCAATGGATGA 855 0.4655 MATVSPEGSFLLSPRKKKIDVIGELLQGYESASRLKFLLQKPFEDDCPLSAHQHLAIVLRSFTHSLSLLTSPSSDVAQNLVVSSENEPPTPDYCLDRKSPDASETRGRSAPANKNRRGCYKRRSYMRCTRKYEQGCRAVKQVQRIQEKPELYQITYIGYHTCKDLLKTPQVVTDSGNNWESFFAADSKNIPSNEVNNKVHHPIIKQEHHHHRPKEETPGDDFTDSSLDPSLWSDLKDLSEAAMVPLGCSDNNNADTVYSCCSGSLDFGVDDSVHFGSDDFHFNG 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1060 284 SMART WRKY_cls 114 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele25g1060 284 MobiDBLite consensus disorder prediction 83 116 - -
Lele25g1060 284 Gene3D WRKY domain 84 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele25g1060 284 MobiDBLite consensus disorder prediction 204 226 - -
Lele25g1060 284 ProSiteProfiles WRKY domain profile. 117 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele25g1060 284 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 122 193 IPR044810 GO:0003700
Lele25g1060 284 SUPERFAMILY WRKY DNA-binding domain 114 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele25g1060 284 Pfam WRKY DNA -binding domain 114 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1060 Lele-ChrLele25 6867952 6870030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1060 15 173 WRKY Transcription Factor Family AT3G56400 31.841 4.94e-21 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele25g1060 WRKY 9e-09 CL0274