Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1055 ATGTTGGTGATCGCAGAGAAAGCCATGCCTGCGACTGTGAGGGGGGAGGAAGGGGTCGACATGATGACAGAAACAAGAGCGATTCCCTTGAAGCAGCAGCACTTTGTTCTGGTACATGGCATAGGAGGAGGAAGTTGGTGCTGGTATAAAATTCGGTGCCTTATGGAGAATTCTGGATACAAGGTCTCATGCATAGACCTCAAAAGTGCTGGAATTGATCGATCTGATGCCGATTCTATTATTTCCTTTGATGATTACAATCAACCTCTCATGGATTTCATGTCTGCTTTGCCTGAGAATGAACAGGTGATATTGGTGGGACATAGCGCCGGAGGGTTGAGTATTACTCAGGCCTGTCACAAGTTTTCAAAGAACATCCGATTAGCAGTGTATTTAGCAGCAACTATGCTCAAGCTGGGATTCCAGACAGAAGAGGATATGAAAGACGGGATACCTAACTTATCTGAGTTTGGGGACGTGTACGAGCTAGGATTTGGACAGGGAGATGATAAGCCCCCAACCAGTACAGTGGTGAAGAAAGAGTTTCAACGCAAAATCATATACCATTTGAGCCCCCATGAGGATTCAACCCTAGCGGCGATGCTTTTGAAGCCCGGGCCGGTTCAAGCTCTGACGAGCGCGCGATTTGACGAAGAAGGGCAAGTGGAGAAGGTGAGGCGCGTGTACATAAGGACGAAGCAGGATAAGGTGGTGAAGGGAGAGCAACAGGAGTCGATGATAAAGAAGTGGCCACCATGTGCAGTGTATGAACTGGACAGTGACCATAGCCCCTTCTTCTCCACCCCATTCGTCCTCTTCGGCCTGCTCGTGAAAGCTGTTGCAGCTTTTGACGTTGGATTCAACTTCCTAAGCCAAAGACAAAGCTGA 888 0.4831 MLVIAEKAMPATVRGEEGVDMMTETRAIPLKQQHFVLVHGIGGGSWCWYKIRCLMENSGYKVSCIDLKSAGIDRSDADSIISFDDYNQPLMDFMSALPENEQVILVGHSAGGLSITQACHKFSKNIRLAVYLAATMLKLGFQTEEDMKDGIPNLSEFGDVYELGFGQGDDKPPTSTVVKKEFQRKIIYHLSPHEDSTLAAMLLKPGPVQALTSARFDEEGQVEKVRRVYIRTKQDKVVKGEQQESMIKKWPPCAVYELDSDHSPFFSTPFVLFGLLVKAVAAFDVGFNFLSQRQS 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1055 295 FunFam putative methylesterase 11, chloroplastic 29 282 - -
Lele25g1055 295 Pfam Alpha/beta hydrolase family 35 269 IPR000073 -
Lele25g1055 295 Gene3D alpha/beta hydrolase 29 283 IPR029058 -
Lele25g1055 295 PANTHER METHYLESTERASE FAMILY MEMBER 32 279 IPR045889 -
Lele25g1055 295 SUPERFAMILY alpha/beta-Hydrolases 34 277 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1055 Lele-ChrLele25 6824671 6827256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1055 31 136 Miscellaneous Gene Families AT5G10300 40.566 6.68e-27 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1055 25 6824671 6827256 Lele02g0126 02 739117 742218 CCT
Lele25g1055 25 6824671 6827256 Lele03g0130 03 725530 728357 CCT
Lele25g1055 25 6824671 6827256 Lele04g0126 04 738428 740481 CCT
Lele01g0124 01 725542 729406 Lele25g1055 25 6824671 6827256 CCT
Lele03g0123 03 695231 699711 Lele25g1055 25 6824671 6827256 CCT
Lele25g1055 25 6824671 6827256 Lele27g1020 27 17833980 17836502 hybridization
Lele25g1055 25 6824671 6827256 Lele28g1054 28 6843032 6846467 hybridization