Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1051 ATGATGTTCAAGTCCTTAATTTCTGCAATTGTTTCACTAAGCTTCTTACTATTCTTCTTCTCTGGCACAACTGTAGCTGATCTGAACTCTGATATACAAGCTCTCTTAGAGTTTGCTTCCAGTGTCCCACATGCACGAAGACTCAACTGGAATTATTCTGCTCCAATTTGCACCTCATGGGTGGGTGTGACTTGCAACTCGGAAAAAACTCGGGTCATTGCTATTCATCTTCCTGGAATTGGCCTCAAAGGTCACATTCCAGAAAACAGCATAGGAAAGCTAGATGCCCTTACAGTACTGAGTCTTCACACCAATGGCCTTAATGGGAGGCTTCCTTCAGACATCCTTTCAATTCCTGCACTTGAGTATGTACATCTCCAGCAGAATAACTTCTCTGGTCCAATCCCTTCATCTGTCTCTCCTAAACTCATTGCACTTGATATTTCTTTGAACTCCTTCTCTGGTACTATCCCACCTACATTTGTTAATCTCAGAAGACTCGCCTGGTTGTATTTTCAAAAAAATTCCATCTCTGGACCTATCCCTGACTTCAACCTCCCAAAGCTCAAATTTCTCAATTTGAGTTATAATAACTTGAGTGGCTCAATTCCAAACTCCATCCAGAAATTTCCTCACAGTTCTTTTCTTGGGAACTCTCTGTTGTGTGGGCCACCTCTGAATCATTGCTCCGCAATCCCCCCTTCTGGATCTCCTCCATCTGCTAACCACTCAGTCACTCCAGGAAGTACCCAAAGTCAAAAAGCTACCAACCCAAAGAAAAGACTTGGATTGGCTTCTATACTTGCCCTGGTAATTGGGGGCTGCGCATTCTTAGCTCTCCTAGTTTTGGTAATCTCTTTGTGCTGTTGTAGGAAGAAAAACGGTCAAAGCAGTGGCATACTAAAAGCAAATGCAGCTTGTGCAGGAAAGAATGAGATTTCAAAGAGTTTTGGAAGTGGAGTACAAGAGGCTGAGAAGAACAAGTTGTTCTTCTTCAGAGGTTGCTCTTATACCTTTGACCTTGAGGATTTGCTAAAGGCCTCAGCTGAAGTTCTTGGAAAGGGAAGCTATGGTACAGCTTACAAGGCTGTTTTGGAGGAAGGAACAACAGTGGTAGTTAAGAGGTTGAGGGAAGTTGTGGTCGGAAAGAAGGAGTTTGAACAGCAGATGGATGTTGTGGGCAGATTAGGAAGCCACCCCAATATCATGCCTCTTCAAGCTTATTACTATTCCAAAGATGAGAAACTTCTAGTTTGCAGCTTCATGCCACGCGGAAGCTTATTTGCTTCATTGCATGGAAACAGGGGAGAAGGAAGAACTCCACTAGACTGGGATGCAAGAATGAAGATCGCACTTGGAGTTGCCAAAGGAATCGCTTTCATACACTCCGAAGGGGGTCCAAAATTCACACATGGCAACATCAAGTCCACCAATGTCCTCCTAACTCAAGACTTCGATGGCTGCATCTCCGACGTCGGATTGCCTCCACTGATGAGCACTCCGGCAACCATGTCCAGATCTAACGGCTACCGCGCACCAGAGGTGATGGACGCCCGAAAAATCACCCACAAATCCGATGTCTACAACTTCGGGGTGCTCCTCCTGGAAATGCTGACGGGGAAATGCCCGATGAGATACCCCGGGCATGACGAGGTGGTAGATCTTCCGAGGTGGGTAAGGTCCGTGGTTCGAGAGGAATGGACGGCGGAAGTGTTCGACGAGGAGCTACTGAGAGGGCGATATGTGGAAGAGGAAATGGTTCAGATGCTTCAGATTGCACTGGCGTGCGTAGTGAAAGTGCCGGATATGAGGCCGAGGATGGAGGAAGCTGTGAGAATGGTGGAGGAAATCAGGCAGCCGGAGTTGAAGAACCGGCCTTCCTCCGAGTCCGAGTCCAATTTGCAAACACCTTGA 1914 0.466 MMFKSLISAIVSLSFLLFFFSGTTVADLNSDIQALLEFASSVPHARRLNWNYSAPICTSWVGVTCNSEKTRVIAIHLPGIGLKGHIPENSIGKLDALTVLSLHTNGLNGRLPSDILSIPALEYVHLQQNNFSGPIPSSVSPKLIALDISLNSFSGTIPPTFVNLRRLAWLYFQKNSISGPIPDFNLPKLKFLNLSYNNLSGSIPNSIQKFPHSSFLGNSLLCGPPLNHCSAIPPSGSPPSANHSVTPGSTQSQKATNPKKRLGLASILALVIGGCAFLALLVLVISLCCCRKKNGQSSGILKANAACAGKNEISKSFGSGVQEAEKNKLFFFRGCSYTFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLREVVVGKKEFEQQMDVVGRLGSHPNIMPLQAYYYSKDEKLLVCSFMPRGSLFASLHGNRGEGRTPLDWDARMKIALGVAKGIAFIHSEGGPKFTHGNIKSTNVLLTQDFDGCISDVGLPPLMSTPATMSRSNGYRAPEVMDARKITHKSDVYNFGVLLLEMLTGKCPMRYPGHDEVVDLPRWVRSVVREEWTAEVFDEELLRGRYVEEEMVQMLQIALACVVKVPDMRPRMEEAVRMVEEIRQPELKNRPSSESESNLQTP 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1051 637 Gene3D Phosphorylase Kinase; domain 1 312 421 - -
Lele25g1051 637 Pfam Leucine Rich Repeat 188 210 IPR001611 GO:0005515
Lele25g1051 637 ProSitePatterns Protein kinases ATP-binding region signature. 352 383 IPR017441 GO:0005524
Lele25g1051 637 Gene3D Transferase(Phosphotransferase) domain 1 422 635 - -
Lele25g1051 637 FunFam pollen receptor-like kinase 1 314 421 - -
Lele25g1051 637 PANTHER OS05G0588300 PROTEIN 11 629 - -
Lele25g1051 637 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 422 628 - -
Lele25g1051 637 FunFam Leucine-rich repeat receptor-like protein kinase 141 229 - -
Lele25g1051 637 SUPERFAMILY Protein kinase-like (PK-like) 350 615 IPR011009 -
Lele25g1051 637 Pfam Protein kinase domain 350 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1051 637 FunFam Leucine-rich repeat receptor-like protein kinase 30 140 - -
Lele25g1051 637 MobiDBLite consensus disorder prediction 236 257 - -
Lele25g1051 637 Gene3D Ribonuclease Inhibitor 142 231 IPR032675 -
Lele25g1051 637 ProSiteProfiles Protein kinase domain profile. 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g1051 637 MobiDBLite consensus disorder prediction 618 637 - -
Lele25g1051 637 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Lele25g1051 637 SUPERFAMILY L domain-like 41 227 - -
Lele25g1051 637 ProSiteProfiles Leucine-rich repeat profile. 188 210 IPR001611 GO:0005515
Lele25g1051 637 Gene3D Ribonuclease Inhibitor 30 141 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1051 Lele-ChrLele25 6812910 6815309 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1051 6 632 Receptor kinase-like Gene Family AT5G58300 58.095 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele25g1051 Pkinase 4.9e-32 CL0016