Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1038 ATGACTGGGTTGCAAAAATGGACTATTAACGATAGTCTTCCTTGTTTGTTCCGGTTGTTCCCTATGTGTGGTACATGGCCATCGCCACATTTCCTGCCGGGATACTTGTTGGGTCACTTCACCTCATGCTTTGCAACTTTCTTCCCTGGACTTGTGATTGCTGCATATTGCACCTGGGAAATTGCACTTCTGTGTTTAGTGGTTGTTCGCCTTATTCTTCTTATAGGGGCCACTTACACCAAGATAATGAACAACATATCAAACACCAAAATGATTTACCAGTCTGAAGTCACAGCTATGACTGAACAGCTCTGCAATAAAATCCTTCACAGAAAACATGGCAAACTTTATATTATAAGCAAAGGAGAGGCACTTATAAAAGGAGTTGGAACAGGAATGTTCCAAACTGTAAGTTTTGTTTCATGGGCTCTCATTGTATGGGTTGGAGCTGTTGTGGTGACTGCTCATAGAGCTTCTGGAGGAGACATTATTACTGCAGTCATGAGCATTCTCTTTGGTGCCATGGAAGACGGAGAAATTTTCATTGATCACCATAATATCAAGGATCTTGATTTGATGTTCCTGAGAAGAAACATAGGAGCTGTTTCCCAGGAACCTTCAGTTTTCACAGGAACCATCAAGGATAATTTGAAAGTGGGAAAGATGGATGCAAATGATCAAGAGATACAGAGAGCAGCAGAAATGTCAAATGCACACTCTTTCATATCACAACTTCCAGATCAGTACCTAACAGAGAACCTTGAACCACTTCCTGAATCAAGTTCAAAATATGAACTTTCAAGCGTCGAAAAGGAAGAATCTTTTCAAGACATTAGATCACAGGAGAAGCAACTGGAGATGCTAGAAGTTCTCACCCAGAATTCAATGAAAGAGGAACAGAACAGCAGAAAAGAAACAAGTAAATTTTTCAGAATCTGGTATGGTCTAACAAATAGAGAGCTTGCAAAGACAGCCATTGGCGCCTTTGCAGCAGCTTTTTCTGGCATCTCAAAGCCAGTTTTTGGATTCTACATTATCACCATTGGAGTAGCATACTTTGGTCACTATGCAAAACGCAAAGTCGCATTGTATTCTGTCATCTTCGCTGCAATAGGGTTAATTTCCTTATTCAGTCACACCTTGCAACATTACTTCTTTGGAATTATTGGAGAAAAGGCCATGGGAAATCTCAGACGAGCTCTTTATTCAGGAGTTCTTCGTAACGAAGTTGGCTGGTTTGACAAACCTGAGAACAGTGTTGGTTCACTAACTTCTCGCATTATAAGTGACACATCATTGGTCAAAGTCATAATTGCTGCTCGAATGTCTGTAATTGTCCAATGCATTTCCTCAGTACTGATAGCAACAGTTGTGAGCATGGTTGTTAACTGGAGAATGGGCTTAGTAGCTTGGGCAGTTATGCCGTGTCACTTCATTGGTGGTCTGGTTCAAGCCAAATCTGCTAAAGGATTCTCGGGAGACAACTCTGCTGCACATTCTGAACTTGTTGCTCTTACATCGGAGTCCACGACCAACATTAGGACTGTCGCATCATTTTGCCATGAAGAACATGCTTTGAGGAAAGCCAAAGCATCCTTAGACATCCCGAAGAAGAAGTACAGAATTGAAAGCATCAAATATGGGATCATTCAGGATTCTCTATTTTCTTATGGAATGTTGCTCATGCTGTAG 1692 0.4119 MTGLQKWTINDSLPCLFRLFPMCGTWPSPHFLPGYLLGHFTSCFATFFPGLVIAAYCTWEIALLCLVVVRLILLIGATYTKIMNNISNTKMIYQSEVTAMTEQLCNKILHRKHGKLYIISKGEALIKGVGTGMFQTVSFVSWALIVWVGAVVVTAHRASGGDIITAVMSILFGAMEDGEIFIDHHNIKDLDLMFLRRNIGAVSQEPSVFTGTIKDNLKVGKMDANDQEIQRAAEMSNAHSFISQLPDQYLTENLEPLPESSSKYELSSVEKEESFQDIRSQEKQLEMLEVLTQNSMKEEQNSRKETSKFFRIWYGLTNRELAKTAIGAFAAAFSGISKPVFGFYIITIGVAYFGHYAKRKVALYSVIFAAIGLISLFSHTLQHYFFGIIGEKAMGNLRRALYSGVLRNEVGWFDKPENSVGSLTSRIISDTSLVKVIIAARMSVIVQCISSVLIATVVSMVVNWRMGLVAWAVMPCHFIGGLVQAKSAKGFSGDNSAAHSELVALTSESTTNIRTVASFCHEEHALRKAKASLDIPKKKYRIESIKYGIIQDSLFSYGMLLML 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1038 563 SUPERFAMILY ABC transporter transmembrane region 320 551 IPR036640 GO:0005524|GO:0016020
Lele25g1038 563 SUPERFAMILY ABC transporter transmembrane region 35 173 IPR036640 GO:0005524|GO:0016020
Lele25g1038 563 CDD ABC_6TM_Pgp_ABCB1_D2_like 316 562 - -
Lele25g1038 563 Gene3D - 176 251 IPR027417 -
Lele25g1038 563 Gene3D ABC transporter type 1, transmembrane domain 32 563 IPR036640 GO:0005524|GO:0016020
Lele25g1038 563 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 176 251 IPR039421 -
Lele25g1038 563 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 325 563 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele25g1038 563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 251 IPR027417 -
Lele25g1038 563 Pfam ABC transporter transmembrane region 326 560 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele25g1038 563 Pfam ABC transporter transmembrane region 36 103 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1038 Lele-ChrLele25 6719987 6725382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1038 227 561 Calmodulin-binding Proteins AT2G36910 28.571 3.35e-29 121