Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1022 ATGTATAAGAGTGCATGTGCATATTTTCCTTTTCCAAGTGCCAAAAGGAAACTCTTCCTATTTCAAACTAAACGAAAATTCATTTCTACTTGCATTCGTTGTTTCAGAGAAAGCATTATAGCAGTTCCAGATACGATTTGTTTAGTTTTAGGAAAAATGAGTCCAAAGAAGCTAAAGGTTGCAACTTCACTTATGTTCATATATGTAGTGTCTCAAAATGTTAACTCTGAGCTTCAGGTTGGGTTTTACAGCGATTCATGTAGATTTGCGGAGTTCATTGTGAAGGATGAGGTCAGAAAAGCGTTTATTCGAAACCCTGGGATTGCTGCTGGGCTTGTGAGAATGCACTTCCATGATTGCTTTGTCAGAGGGTGTGATGCATCGGTGCTTTTAGATTCCACAGCTTCAAACACAGCAGAAAAGGACTCGCCAGCAAATAAGCCAAGTCTGAGAGGATATGAAGTGATCGACAATGCTAAAGCACGACTTGAAGCAGTTTGCAAAGAAACTGTTTCATGTGCTGATATAGTTGCATTTGCAGCAAGAGATAGCATTGAGTTAAGTGGAGGAGTTGGGTATGATGTTCCTGCAGGAAGAAGAGATGGGAAAATATCACTAGCTTCAAACACAAGGAAACTTCCCCCTCCAACTTTCAACCTTAACCAACTTACTCGGCTCTTTGCAAGTAAGGGCCTCACACAAGAAGAAATGGTTACCCTGTCTGGGGCACACACCATTGGACGATCATTTTGCTCTTCATTCAGCAGCAGATTATACAATTTCAGTAGTACTTCAAGTGTGGATCCAAGTTTAGATTCAGCATATGCATCCCAATTGAAGCGTCAATGTCCTCAAGGAACCACCAACAAAGTGGTTCCCATGGATCCTTCTAGTCTTGCAAAAGCAGATTCAGGTTACTATGTGAATGTTTTGGGAAATAGAGGTCTGTTTCCATCAGATCAAGCTCTCTTGTCCAGAACAGAAACAGCTGAGCAGGTGAATCAGTATGCGAGGAAACCGTTTCTGTGGATGAATAAATTTGCTGGTGCCATGGTCAAGATGGGTCAGATTGATGTGTTAACTAGGAATGATGGAGAGATCAGAACAAATTGCAGGAAGGTCAATAACTAG 1131 0.4129 MYKSACAYFPFPSAKRKLFLFQTKRKFISTCIRCFRESIIAVPDTICLVLGKMSPKKLKVATSLMFIYVVSQNVNSELQVGFYSDSCRFAEFIVKDEVRKAFIRNPGIAAGLVRMHFHDCFVRGCDASVLLDSTASNTAEKDSPANKPSLRGYEVIDNAKARLEAVCKETVSCADIVAFAARDSIELSGGVGYDVPAGRRDGKISLASNTRKLPPPTFNLNQLTRLFASKGLTQEEMVTLSGAHTIGRSFCSSFSSRLYNFSSTSSVDPSLDSAYASQLKRQCPQGTTNKVVPMDPSSLAKADSGYYVNVLGNRGLFPSDQALLSRTETAEQVNQYARKPFLWMNKFAGAMVKMGQIDVLTRNDGEIRTNCRKVNN 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1022 376 PRINTS Plant peroxidase signature 151 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 PRINTS Plant peroxidase signature 87 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 PRINTS Plant peroxidase signature 293 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 PRINTS Plant peroxidase signature 111 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 PRINTS Plant peroxidase signature 235 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 PRINTS Plant peroxidase signature 170 180 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 PRINTS Plant peroxidase signature 349 362 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 PRINTS Plant peroxidase signature 309 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 PRINTS Plant peroxidase signature 189 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 ProSiteProfiles Plant heme peroxidase family profile. 77 375 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 FunFam Peroxidase 81 225 - -
Lele25g1022 376 SUPERFAMILY Heme-dependent peroxidases 77 375 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 FunFam Peroxidase 214 354 - -
Lele25g1022 376 ProSitePatterns Peroxidases proximal heme-ligand signature. 236 246 IPR019793 -
Lele25g1022 376 Gene3D - 81 375 - -
Lele25g1022 376 PRINTS Haem peroxidase superfamily signature 109 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 PRINTS Haem peroxidase superfamily signature 189 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 PRINTS Haem peroxidase superfamily signature 171 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 PRINTS Haem peroxidase superfamily signature 295 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 Pfam Peroxidase 94 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 ProSitePatterns Peroxidases active site signature. 109 120 IPR019794 GO:0004601
Lele25g1022 376 PANTHER PEROXIDASE 25-RELATED 65 363 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele25g1022 376 CDD secretory_peroxidase 77 374 IPR033905 GO:0004601|GO:0042744
Lele25g1022 376 Gene3D Peroxidase, domain 2 214 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1022 Lele-ChrLele25 6613447 6616028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1022 78 375 Peroxidase AT5G51890 48.837 1.02e-93 281