Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1016 ATGGGTGAGGTCGTGTTGAGTTCTGAGAAGGTTCTGGAGGCGAAGGAGGTAGAGACCGAGACCGATAAGCAGAAGGAGACGGAGGAGGAAGAGAGTGGAACAGAGAGTAAAGATGATGAATTGAATAATGGATTGATGAGGTGGAAGAAATTCTTGCCGAAGATGACATTGAGGGTGTTATTGGCTGAAGCTGATGATTCTACACGGCAGATTATAGCTGCGCTTCTCAGAAAATGCAGCTACAGAGTGGTTGCTGTTTCTGATGGCTTGAAGGCATGGGAAATACTGAAGGGAAGACCACACGATGTTGATCTTATACTAACAGAAGTAGATTTGCCATCAATATCTGGCTATAGTCTTCTCACATTAATTATGGAGCATGAAGTTTGCAAAAACATTCCTATTATTATGATGTCTTCGCAAGATTCAATTAACACAGTCTACAAATGCATGTTGAGAGGTGCTGCTGACTACCTTGTTAAGCCCCTTAGAAAAAACGAGCTGAGGAATTTGTGGCAGCATGTTTGGAGAAGACAATCTTCAACCTCTGGTGTGAACGGTCTTGAAGATGAGAGTGTTGCACAATCGAAGGCTGAAGCCACTGCTGAAAACAATGCTCCAGACAATCATTCAAGTGGCGATGCTGCACGTATTCAAAGAAATAAGGAATTAATTGAGAAAGGAAATGATGCTCAGAGCTCTTGTGGAAAGCCTGATTTGGAAGCTAAGAGTGCTCCGGTGGATCATGTGTACGAATCTTCCCAAGCAAAACATGTTGAATCATACCCAAGAGAAAAAAAGATGCAGGAGATTGAAATGTGCATCCAAGTAGGCCAGACCTTGACCATGCACGACAATCACGCAGGAGGATTAACTGTTCTGATCCACAAAAATGGTGAGACCAATTCAGCTTATGGCAAGGATGGTGACCAAGAACATTTTACGAGTCCTGACACCAACCAGGATACTTATGACAATCGCACTGTTCAAATTACCTCTTCAAAGGAAGCTATTGACTTGCTTGGAGCATTTCGAAATCATCCAAACAGCAGTCACAAAAGTTCCTCAGTCAATTGCACGGGCATGTTTGACTTTTCTCCTCAGCTGGATCTTTCCTTAAGAAGATCTCATCCCAGCAACTTTGAGAATGAATCTACTAAAGAAAGGCATGCCCTGATGCATTCTAGTGGCTCAGCTTTCAGGAGGTATACTAATAGGCAAACACAAGCCCCGCCTGCAGTGTCCACAAACTGCTGCAATCAAGAAAGAGGACAGATAAAAAATTGTGAGAACAGTATCTCAAACATTTTAGGCTATAACTCAGACAGTTCAATGCCTAATTTGCGAAGAAGTCTTGTGTCTTCAGCTACACCGCTGTCAAAAGAATCTGAGCCCACAACTTCACCCTCCCAGGGTAGGCTTTCACTTCCAATCCCAGTAAAAGCTGTAAGGTACGACGATCCATGCACGGCCTATGGTTCTACACTTCCTCCAATGTTCCATACGCAATCAGGCCCCACGTCAACATTAAATCCAGACTCAGTACACCGTGAACCAACCTTTCAAGCGAATGGTTTTTATCAGTCAAATACAAAAGAAAACAACAGTTCAGAGCAGCTTTATGAACCTCAAGGTCAAAATGGAAACAACACAAGCCACATTGTGTACATGCCGGAAAGCAATTCAGAACACGTGGAGGATCGAAGACATATGTCTGCGACAACTGGTCAAAGTGCCTGCACGAACAGCAACGCCGACCAGGTTGCTATAGCTAGGGCAGCTTCAGAGAGCATGGCTGAAGACCTCACAAATAATGGGATTTCTCATCGATCTCTCCAAAGAGAAGCAGCTCTAAACAAATTTCGCCTGAAACGAAAAGAGAGATGCTTTGAAAAGAAGAGTTTGATTGATCTTGAATTGCGTAAAGAGGCACAGATGGGTGAAGGCTTGAGAAGTTTATGGCCTGAAGAAGGATCACTTTACATTCATGTCTGTGGATAA 2001 0.4343 MGEVVLSSEKVLEAKEVETETDKQKETEEEESGTESKDDELNNGLMRWKKFLPKMTLRVLLAEADDSTRQIIAALLRKCSYRVVAVSDGLKAWEILKGRPHDVDLILTEVDLPSISGYSLLTLIMEHEVCKNIPIIMMSSQDSINTVYKCMLRGAADYLVKPLRKNELRNLWQHVWRRQSSTSGVNGLEDESVAQSKAEATAENNAPDNHSSGDAARIQRNKELIEKGNDAQSSCGKPDLEAKSAPVDHVYESSQAKHVESYPREKKMQEIEMCIQVGQTLTMHDNHAGGLTVLIHKNGETNSAYGKDGDQEHFTSPDTNQDTYDNRTVQITSSKEAIDLLGAFRNHPNSSHKSSSVNCTGMFDFSPQLDLSLRRSHPSNFENESTKERHALMHSSGSAFRRYTNRQTQAPPAVSTNCCNQERGQIKNCENSISNILGYNSDSSMPNLRRSLVSSATPLSKESEPTTSPSQGRLSLPIPVKAVRYDDPCTAYGSTLPPMFHTQSGPTSTLNPDSVHREPTFQANGFYQSNTKENNSSEQLYEPQGQNGNNTSHIVYMPESNSEHVEDRRHMSATTGQSACTNSNADQVAIARAASESMAEDLTNNGISHRSLQREAALNKFRLKRKERCFEKKSLIDLELRKEAQMGEGLRSLWPEEGSLYIHVCG 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1016 666 Pfam Response regulator receiver domain 59 170 IPR001789 GO:0000160
Lele25g1016 666 MobiDBLite consensus disorder prediction 227 247 - -
Lele25g1016 666 Gene3D - 55 288 - -
Lele25g1016 666 MobiDBLite consensus disorder prediction 13 40 - -
Lele25g1016 666 MobiDBLite consensus disorder prediction 197 214 - -
Lele25g1016 666 MobiDBLite consensus disorder prediction 183 214 - -
Lele25g1016 666 MobiDBLite consensus disorder prediction 454 474 - -
Lele25g1016 666 PANTHER TWO-COMPONENT RESPONSE REGULATOR 57 349 IPR045279 GO:0009736
Lele25g1016 666 SMART REC_2 57 172 IPR001789 GO:0000160
Lele25g1016 666 ProSiteProfiles Response regulatory domain profile. 58 176 IPR001789 GO:0000160
Lele25g1016 666 MobiDBLite consensus disorder prediction 497 551 - -
Lele25g1016 666 SUPERFAMILY CheY-like 57 184 IPR011006 -
Lele25g1016 666 CDD psREC_PRR 59 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1016 Lele-ChrLele25 6578586 6583248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1016 37 643 Response Regulator Gene Family AT5G24470 38.599 1.57e-107 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele25g1016 Response_reg 4.5e-20 CL0304