Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1013 ATGCTCTGCTCGGCTCCGGCCGCCAAGTCCGGTTTGAACTGGCTCGACCGGCTCCGTTCCATCAAGGGCATCCCTACCGGCGACGGCCTCGACCTCGACTCTTTCCTCTCCAGCCACTGTAGCTCCAATTCTGACCATACTCTCTTTCTTCCGAAGCGGGACCGGAATCGGGCTCGGGGCCCCGAGTCTTCTACGCCCGATGCTGACCCACCATCAATGGGGAGCGTCCTCGCAGAGCTCTTCAACATGGGGAGTAGCTTCAGCCAAAGTTCCAAGCTTTCCGGCAAGAAGTGTCCCAGGAAGCAGACAAACCCCAAATCTTTCGTCGCTTCTTCTGCGAGTAACAGTAGAATAATCGAATGTGCGCGAAAGGACGAGAAACATGTCTCCTGTACGAATTCTTCTTCCAATAACCTGGAGCTGGAAAGGAATGAAGAGAACATGGCTGGTTGGGATGTAGAGGAGGAGGAGGAAGGCAATGAAAAAGAGAGAGATGGGAACGAGTTGAAGGGGTTTTCAAAGAGTGAGGTTACAGTGATTGATACGAGTTGCCCAGAATGGAAGGTTGACAAGCTCGTGTTTAGAAAGAGCAATGTATGGAAAGTCAGAGAGAGGAAAGGAAAGTCCAAGGTTTTTGGGAAGAAAAAGAGGAAAGGAAGTTTCGGGTTTGATAAGGAACTCAGGCTTTTAGATTCTCAATTTCGATCCCCCGTGGATTCAGACACGGAAGAGCTTCGAACGCGATCTACCCGAGAACAGAATACTGAGAAGAATCTGAAGGATGTTGATGTAGACACAACCCAGGATGATCCAAAGCCTCCTCCCAGAAAGAGGTTCCAATTTTCTAGGTCGCCTACGACATCAAGAAAGGAAAACAGATCTGCAGTGTGTTATAGGTCCGTGGATGAAATCAATAGAACAATAGATTTGTTAGACCCATTTGGTGGCATTAATGTAATTGTAAGGCTTCCTGCAATTTTCAATTATGATGTGGATAATCAACTGATTCCAAGAACCAAATATTTGATTGAGCTTAGTGGAGAAGATGAGGATGGCGCCGGGAAGGTGCTGCCTAAGCTGCCGGCAATTTTGAGTTACCGTGTGGAGCATGTAGAGGGCCATGTAGAGTTCCTGAGGTCTTTCGTAGGCTGGAATGATCAAATTGGGTATGAATATAGTACAAAGGATTTGGCAACAGCAATTGGATCTACCACAAGGACAAGATGTGAGAATTTGCAGAAGGTGATTGATCTATTCTTGAGTTGTGGACTTTCATGCGAAGACATAGTTGTTATGAGCAAGAAGCATCCTCAGATACTGCAGTACAATCATACATCTCTAGAGAAGAAGATCAAGTACTTAATCGAGGAGATGGATGGTGACATCGAAGAGTTACTAGCTTTTCCTGCATTCCTCGGTTACAAGCTGGACGAACAGAATTAA 1443 0.4664 MLCSAPAAKSGLNWLDRLRSIKGIPTGDGLDLDSFLSSHCSSNSDHTLFLPKRDRNRARGPESSTPDADPPSMGSVLAELFNMGSSFSQSSKLSGKKCPRKQTNPKSFVASSASNSRIIECARKDEKHVSCTNSSSNNLELERNEENMAGWDVEEEEEGNEKERDGNELKGFSKSEVTVIDTSCPEWKVDKLVFRKSNVWKVRERKGKSKVFGKKKRKGSFGFDKELRLLDSQFRSPVDSDTEELRTRSTREQNTEKNLKDVDVDTTQDDPKPPPRKRFQFSRSPTTSRKENRSAVCYRSVDEINRTIDLLDPFGGINVIVRLPAIFNYDVDNQLIPRTKYLIELSGEDEDGAGKVLPKLPAILSYRVEHVEGHVEFLRSFVGWNDQIGYEYSTKDLATAIGSTTRTRCENLQKVIDLFLSCGLSCEDIVVMSKKHPQILQYNHTSLEKKIKYLIEEMDGDIEELLAFPAFLGYKLDEQN 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1013 480 MobiDBLite consensus disorder prediction 280 294 - -
Lele25g1013 480 MobiDBLite consensus disorder prediction 238 277 - -
Lele25g1013 480 MobiDBLite consensus disorder prediction 41 75 - -
Lele25g1013 480 MobiDBLite consensus disorder prediction 48 62 - -
Lele25g1013 480 Pfam mTERF 354 478 IPR003690 GO:0003690|GO:0006355
Lele25g1013 480 MobiDBLite consensus disorder prediction 88 111 - -
Lele25g1013 480 Gene3D Transcription termination factor 3, mitochondrial 284 479 IPR038538 -
Lele25g1013 480 PANTHER FANTOM PROTEIN 1 307 - -
Lele25g1013 480 SMART mt_12 317 348 IPR003690 GO:0003690|GO:0006355
Lele25g1013 480 SMART mt_12 354 385 IPR003690 GO:0003690|GO:0006355
Lele25g1013 480 SMART mt_12 430 461 IPR003690 GO:0003690|GO:0006355
Lele25g1013 480 MobiDBLite consensus disorder prediction 238 294 - -
Lele25g1013 480 MobiDBLite consensus disorder prediction 132 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1013 Lele-ChrLele25 6557876 6566135 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele25g1013 mTERF 2e-16 No_clan