Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1012 ATGGCTGCGGGCAAGCTGGCTTGCACATACGCATCCTTGATTCTCCATGATGATGGAATAGAAATTACTGCGGAGAAGATTAATAATTTAGTCAAGGCGGCGAATGTGTCCGTGGAATCGTACTGGCCGAGCCTATCTGCGAAACTTGCAGAGAAGAAGAACATTGAGGATCTCATTTTGAATGCTGGTTCCGTTGCTGTTGCTCCTGCCGGTGGAGACGCCACCGCAGCCACTGCCGCCGTGGAGAACGAGTTTATACTGGGAAAAAAACAAGAAGAAAGTATAACAGGAACAAGGCACCCTGAAATGCATCATGGTTCTTTAACGGCAACGTTCCCTCGAGTAGAAGGGCTTCTATTGAAGAAAGAGGAGGCCCAGGTCTCGTGCCGTGAACTGGGAACCCTAGACCCTAACCCTTGCTGCATCTGCTTGTTCCGTATCGGGAACGTTATCTTCGGCCGGAGCTCGCTACTGGGAGAGAGACTTGTTCGGTTCGTTGGCCGACTTTCCTTCTGA 516 0.5058 MAAGKLACTYASLILHDDGIEITAEKINNLVKAANVSVESYWPSLSAKLAEKKNIEDLILNAGSVAVAPAGGDATAATAAVENEFILGKKQEESITGTRHPEMHHGSLTATFPRVEGLLLKKEEAQVSCRELGTLDPNPCCICLFRIGNVIFGRSSLLGERLVRFVGRLSF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1012 171 Pfam 60s Acidic ribosomal protein 21 81 - -
Lele25g1012 171 CDD Ribosomal_P1 6 68 - -
Lele25g1012 171 Gene3D - 2 63 IPR038716 -
Lele25g1012 171 FunFam 60S acidic ribosomal protein P1 1 63 - -
Lele25g1012 171 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1012 Lele-ChrLele25 6546898 6554321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1012 1 93 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 60.215 1.78e-30 105