Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele25g1010 | ATGGCTGTTGCTGAGAATGTTGGTGCCATAATCGGCTCTTCTGGCGAAAATTTGGAAAACCGTGTAGTATCCTCCGACTCAACTTTACCTAATGAACTGGAGAAATCGAAGCTCAAACCTGGTTCCATGGGAAATGGTATAGAAACTAATGTTCAGGCCATCAATGGTGATCAGAATCTGAACGTTGTCTTCAACAACAAAGACATCGTTTCGACTGCTATATCAGTCCCCGATAATAACTATAAAGCTCAGATGGCTCAGATGCGAAATGGATTTGAAGAAAATGGGGTCCAGACTCAACAGATGGTGATGAACGATGGTGGATATGGCATCAACCAAATTTCTAATGGGGTGAGAAATGGTCGAGATGACAATGGTGAAAGTTTCAAGCGAGATATGAGGGATTTGGCGGAACTATTATCAAAGTTGAATCCTATGGCTGAAGAATTTGTGCCTCCATCGCTTAATAAGAATCATGGGATTTTAGGTGGCGGGGAAGGATTTGGCTACCCTAACAATTTTCTATTACTGGCTAACTTTGGCAATGCCAATGGTCAAATTAACAGAAGGAGGAATAATGGCTATAATCAAGGTAAGAGAAGAATGAATCAGAAAATGGATCTGGAAAAGAGAGAAGAGATGATAAGAAGGACCGTTTATGTGTCTGACATTGATCAACAGGTTACTGAAGAGCAGATGGCGGCTCTCTTTCTTAACTGTGGTCAGGTTGTTGATTGTCGAGTATGTGGGGATCCAAATTCCATTCTTCGTTTTGCCTTCATTGAGTTCACAGATGAAGAAGGTGCTAGGGCTGCTTTGAATCTATCTGGCACTATGCTTGGATATTATCCAGTGAGAGTACTGCCTTCAAAAACTGCCATTGCACCTGTTAATCCAACATTTTTGCCTAGGTCTGAAGATGAACGGGAGATGTGTTCAAGAACCATTTATTGCACAAATATTGACAAAAAGGTTACTCAGGCAGATGTCAAACTCTTCTTTGAGTCTCTCTGTGGAGAGGTTCATCGCTTGAGGCTTCTTGGTGATTATCATCATTCAACTAGAATTGCATTTGTTGAGTTCACGATGGCTGAAAGTGCAATTGCAGCTCTGAACTGTAGTGGCGTGGTTTTGGGATCACTTCCTATCAGGGTAAGTCCATCAAAGACACCAGTCCGGTCTCGCACACCTCGTTCTCATATGCACTGA | 1209 | 0.4218 | MAVAENVGAIIGSSGENLENRVVSSDSTLPNELEKSKLKPGSMGNGIETNVQAINGDQNLNVVFNNKDIVSTAISVPDNNYKAQMAQMRNGFEENGVQTQQMVMNDGGYGINQISNGVRNGRDDNGESFKRDMRDLAELLSKLNPMAEEFVPPSLNKNHGILGGGEGFGYPNNFLLLANFGNANGQINRRRNNGYNQGKRRMNQKMDLEKREEMIRRTVYVSDIDQQVTEEQMAALFLNCGQVVDCRVCGDPNSILRFAFIEFTDEEGARAALNLSGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQADVKLFFESLCGEVHRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRSRTPRSHMH | 402 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele25g1010 | 402 | PANTHER | SERINE/ARGININE-RICH SPLICING FACTOR | 138 | 396 | - | - | |
Lele25g1010 | 402 | FunFam | Polyadenylate-binding protein-interacting protein 11 | 180 | 294 | - | - | |
Lele25g1010 | 402 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 219 | 281 | IPR000504 | GO:0003723 | |
Lele25g1010 | 402 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 316 | 383 | IPR000504 | GO:0003723 | |
Lele25g1010 | 402 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 217 | 292 | IPR000504 | GO:0003723 | |
Lele25g1010 | 402 | FunFam | Polyadenylate-binding protein-interacting protein 10 | 308 | 386 | - | - | |
Lele25g1010 | 402 | Gene3D | - | 301 | 398 | IPR012677 | - | |
Lele25g1010 | 402 | Gene3D | - | 181 | 294 | IPR012677 | - | |
Lele25g1010 | 402 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 314 | 390 | IPR000504 | GO:0003723 | |
Lele25g1010 | 402 | SMART | rrm1_1 | 218 | 288 | IPR000504 | GO:0003723 | |
Lele25g1010 | 402 | SMART | rrm1_1 | 315 | 386 | IPR000504 | GO:0003723 | |
Lele25g1010 | 402 | Pfam | Ataxin-2 C-terminal region | 140 | 154 | IPR009818 | - | |
Lele25g1010 | 402 | CDD | RRM2_CID8_like | 310 | 391 | IPR034825 | - | |
Lele25g1010 | 402 | CDD | RRM1_CID8_like | 215 | 294 | IPR034823 | - | |
Lele25g1010 | 402 | SUPERFAMILY | RNA-binding domain, RBD | 188 | 293 | IPR035979 | GO:0003676 | |
Lele25g1010 | 402 | SUPERFAMILY | RNA-binding domain, RBD | 305 | 395 | IPR035979 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele25g1010 | Lele-ChrLele25 | 6534925 | 6539285 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele25g1010 | 216 | 378 | Eukaryotic Initiation Factors Gene Family | AT1G34140 | 25.749 | 1.47e-10 | 60.5 |