Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0998 ATGGAGGTTGATGAAGAGTATATTCAAGCATCAGAAGAAAGCTTCATCAGCTGCTCAGAGCCGCCGCCTCAGAATTCAAGGAAGAAGAACAAAGTGGTGAACAAGAGGAGGTTTAGTGATGAACAAATCAGATCATTGGAGTGCATATTTGAGTCAGAGTCCAAGTTAGAGCCAAGGAAGAAGATCCAAGTAGCAAGAGATCTTGGTCTGCAACCTCGCCAAGTCGCCATATGGTTCCAGAACAGAAGAGCCAGGGGGAAATCCAAATGGATTGAGCAAGAATACAGGAAGCTCAGAGATGAGTATGACGATTTAGTTTCCAGGTTTGAGTCCCTCAAGAAAGAGAAGGCGTCCTTGCAAGTAGAGTTGCAGAATCTTCATGATCTAATGGAGACATCTCACAATGGTGAAGAGAAAACGAGCACAGATAAGCCAAGTTCCTCTTATGAGGGTTTACATGTCAGAGAAGAAGCCATGCTTTTACGAGATCAAAGTGAAATGAGCAAGAAGAATAATAATGGGTATTCTGAAGATAATACAGAACACCAACTTCTGAGAATGGAGGAGCTTGAAAAATGGTACGGTGGAGATCCAAGTGGCCTCTTAGATCAACCTTGTAGTTCACATTGGTTGGATTTCTGGACTTGA 648 0.429 MEVDEEYIQASEESFISCSEPPPQNSRKKNKVVNKRRFSDEQIRSLECIFESESKLEPRKKIQVARDLGLQPRQVAIWFQNRRARGKSKWIEQEYRKLRDEYDDLVSRFESLKKEKASLQVELQNLHDLMETSHNGEEKTSTDKPSSSYEGLHVREEAMLLRDQSEMSKKNNNGYSEDNTEHQLLRMEELEKWYGGDPSGLLDQPCSSHWLDFWT 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0998 215 FunFam Homeobox-leucine zipper protein ATHB-7 12 89 - -
Lele25g0998 215 MobiDBLite consensus disorder prediction 12 33 - -
Lele25g0998 215 Pfam Homeobox associated leucine zipper 90 130 IPR003106 GO:0006355|GO:0043565
Lele25g0998 215 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 27 179 IPR045224 GO:0003700
Lele25g0998 215 SMART HOX_1 27 93 IPR001356 GO:0003677
Lele25g0998 215 MobiDBLite consensus disorder prediction 12 28 - -
Lele25g0998 215 Pfam Homeodomain 35 87 IPR001356 GO:0003677
Lele25g0998 215 MobiDBLite consensus disorder prediction 131 150 - -
Lele25g0998 215 PRINTS Lambda-repressor HTH signature 69 85 IPR000047 GO:0003677
Lele25g0998 215 PRINTS Lambda-repressor HTH signature 60 69 IPR000047 GO:0003677
Lele25g0998 215 SUPERFAMILY Homeodomain-like 17 88 IPR009057 -
Lele25g0998 215 Coils Coil 95 129 - -
Lele25g0998 215 ProSitePatterns 'Homeobox' domain signature. 64 87 IPR017970 GO:0000981|GO:0006355
Lele25g0998 215 CDD homeodomain 35 90 IPR001356 GO:0003677
Lele25g0998 215 ProSiteProfiles 'Homeobox' domain profile. 29 89 IPR001356 GO:0003677
Lele25g0998 215 Gene3D - 16 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0998 Lele-ChrLele25 6432073 6432831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0998 11 122 Homeobox Transcription Factor Family AT2G46680 61.607 2.37e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele25g0998 Homeodomain 7.8e-16 CL0123