Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0982 ATGGCGAGTTCTGAGACCAAGCTCGTGCAGGAGTTGATTCTGTATGCAGCGAGCGCCGCATTGAGTTGCTTGGTCTTGTTTGTGGGTCTCCGGCAACTCGACCCGAACCGTGAGGCTTCAAAGAAGGCACTTGAGCACAAGAAGGAGATAGCCAAGCGTTTGGGTCGTCCTCTTATTCAGACAAACCCTTACGAGGATGTTATTGCTTGTGATGTTATAAATCCTGATGACATTGATGTGGAGTTTGATTCCATTGGAGGGCTGGAAAAGATCAAGCAAGCTTTATTTGAGCTTGTTATACTGCCTCTTAAACGACCAGAGCTGTTTTCTTATGGCAAGCTTCTTGGACCTCAGAAAGGGGTACTACTGTATGGTCCCCCTGGAACTGGGAAAACTATGCTTGCCAAAGCTATTGCGAAGGAATCTGGAGCTGTTTTTATTAATGTGAGGATATCAAACCTGATGAGCAAGTGGTTTGGTGATGCTCAAAAGCTTGTGACAGCTGTATTTAGCCTGGCATATAAGCTCCAGCCTGCCATTATATTCATTGATGAAGTTGACAGTTTTCTTGGTCAGCGCCGTTCATCAGATCATGAGGCATTATTAAATATGAAAACTGAGTTTATGTCCTTGTGGGATGGATTTACCACAGACCAAAATGCTCGAGTGATGGTCCTTGCAGCAACCAATCGTCCTTCAGAACTTGATGAAGCCATACTTCGGCGTCTTCCTCAAGCCTTCGAAATTGGAGTTCCAGATCAAAAGGAGAGGGTTGAGATATTAAAGGTTATCTTGAAGGGTGAGATAATTGAAGACAACATTGACTTTGATTACACAGCTGGCTTGTGTGAGGGTTATACAGGTTCAGATTTATTTGAACTCTGCAAGAAAGCTGCTTATTTCCCTATTAGGGACCTACTAGATGAAGAGAAAAAAGGGAAACAGTCTCCTGCACCAAGGCCATTGTCACAGTCAGATTTGGAGAAGGTCCTTGCCACTTCAAGGAAAACGAAGGTTGCTGCAAGTGAATACAACGGATTAACCCTGCATACACCAACATGGTCGGTGCACAGGGAGTCAGGTGATTATCAGTTTCAAGATGCAATCAGTGAATTATCTAAGCTTGTGGTCTCGCAAATTATTAACCTCCAATCTGACGCTCAGGATCCTTAA 1173 0.4408 MASSETKLVQELILYAASAALSCLVLFVGLRQLDPNREASKKALEHKKEIAKRLGRPLIQTNPYEDVIACDVINPDDIDVEFDSIGGLEKIKQALFELVILPLKRPELFSYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVTAVFSLAYKLQPAIIFIDEVDSFLGQRRSSDHEALLNMKTEFMSLWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQAFEIGVPDQKERVEILKVILKGEIIEDNIDFDYTAGLCEGYTGSDLFELCKKAAYFPIRDLLDEEKKGKQSPAPRPLSQSDLEKVLATSRKTKVAASEYNGLTLHTPTWSVHRESGDYQFQDAISELSKLVVSQIINLQSDAQDP 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0982 390 SMART AAA_5 117 253 IPR003593 -
Lele25g0982 390 ProSitePatterns AAA-protein family signature. 223 242 IPR003960 GO:0005524|GO:0016887
Lele25g0982 390 Pfam AAA+ lid domain 273 309 IPR041569 -
Lele25g0982 390 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 11 344 - -
Lele25g0982 390 FunFam ATPase family AAA domain-containing protein 1 79 256 - -
Lele25g0982 390 Gene3D - 79 337 IPR027417 -
Lele25g0982 390 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Lele25g0982 390 CDD AAA 86 250 - -
Lele25g0982 390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 302 IPR027417 -
Lele25g0982 390 Pfam ATPase family associated with various cellular activities (AAA) 121 250 IPR003959 GO:0005524|GO:0016887
Lele25g0982 390 Gene3D - 252 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0982 Lele-ChrLele25 6355833 6359618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0982 38 317 Calmodulin-binding Proteins AT3G56690 32.746 1.40e-38 145