Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0979 ATGGCTGCTATCACTTCAGTTGCTCTTCAGTACTCGTCCTCGTCGTCTTTACAATCCCAGATGCATTCCTCGCCATTGGCACCTTCTTTAGAACCCACTCATGATCATAACTTGTGGGTGAGAGTGAGATCTCAGAAATCCACGAGGCAGAGATTGTGCCCTCAGAATAATCCCAAGGGGTTAACAATCCGAAGTGCGGCTACCAAACAAGCCAAATCACCAGCTGAAGAAGAGTGGAAGAAAAAGCGAGAAGTTCTGCTGCAGAAAAGAGTAAGAAGTGTGGATGCCAAGGAAGCTCTGCGCCTTCAGAAAGAAAATAACTTCGTGATTCTTGACGTTAGACCAGAAGCAGAGTTCAAAGAGGCCCATCCCCCAGGAGCTATCAATGTACAAATATACAGGCTAATAAAGGAGTGGACAGCTTGGGACATAGCCAGGCGAGCTGCATTTGCATTTTTTGGAATTTTCCAAGGGACTGAAGAGAACCCTGAGTTCTTACAGAGTGTGGAAGCACAATTAGATAAGAATGCCAAGATTATTGTAGCTTGCTCAACAGGGGGCACCATGAAACCATCCCAAAGTCTACCGGAAGGTCAACAATCAAGATCATTGATAGCAGCCTACTTGCTAGTCCTCGACGGTTATACCAATGTCTTTCATCTAGAAGGTGGTCTTTACTCATGGTCGAAAGAGGAACTGCCACTGGTTTCAGAGGAGTGA 720 0.4583 MAAITSVALQYSSSSSLQSQMHSSPLAPSLEPTHDHNLWVRVRSQKSTRQRLCPQNNPKGLTIRSAATKQAKSPAEEEWKKKREVLLQKRVRSVDAKEALRLQKENNFVILDVRPEAEFKEAHPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFQGTEENPEFLQSVEAQLDKNAKIIVACSTGGTMKPSQSLPEGQQSRSLIAAYLLVLDGYTNVFHLEGGLYSWSKEELPLVSEE 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0979 239 Gene3D - 89 238 IPR036873 -
Lele25g0979 239 ProSiteProfiles Rhodanese domain profile. 104 237 IPR001763 -
Lele25g0979 239 SMART rhod_4 94 234 IPR001763 -
Lele25g0979 239 MobiDBLite consensus disorder prediction 44 69 - -
Lele25g0979 239 CDD RHOD 98 228 - -
Lele25g0979 239 MobiDBLite consensus disorder prediction 44 78 - -
Lele25g0979 239 Pfam Rhodanese-like domain 96 230 IPR001763 -
Lele25g0979 239 FunFam Rhodanese-like domain-containing protein 14, chloroplastic 78 236 - -
Lele25g0979 239 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 89 236 IPR036873 -
Lele25g0979 239 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 7 238 IPR043186 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0979 Lele-ChrLele25 6346082 6347912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0979 1 235 Sulfurtransferasese or Rhodanese AT4G27700 64.255 2.05e-104 300