LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele25g0962	ATGGACTGCTACCATACTGACTTTGATTTACCAAACTTCGCTTACCCGCATGGCTTCACCTCGTATAACCCTACCTGTCAACATGAAACAATATCGGAGATGTCACCTGTTATGGGTTTAGCTGACATGGCTCTTATGGTCCCACTTCCGCCGCCATATGAAAGCAACGAAGCTTACTCGAACCAGTTACCGGAACTCGAAAATTTCGACTTTAACTTCGCTGGGTTTGATTACAATGATTTCCCTTCTTTTTATGATGACTTAGTGATCGACGAAAAGCCTCGTACCATTGTTCTTCCTAATCAATCTCAGTGCGAGACTTTTCCGGTCCAGAACGCCCAATCTTCGAGCTCTTTGTTAATTGGAAATGGGTTTAGGTTTGCCCCTTCGGTTAAAGAAGATGAAACTAGGAACAGGATTAGCTATAACTGCAGAAAGAAAAGATCATCCAGCTTAGAATTAGATGAGATAAGGAAGTATTTTGATGTTCCCATAACACAAGCTGCGAAAGAACTGAACGTGGGTTTGACACTCCTGAAAAGAAGATGCAGAGAGCTGAATATTACAAGGTGGCCTCATCGGAAAATAAAGAGCTTGAAGGCACTCATCGACAATGTCAAGGAACTGGGTTTGGCGGACGAGGTGGCTATGTTGCAGAAGCATAAGAAGCTCATGGAGAAGTTGCCTGATCTGGAATTGAGCGAGGAAACTAAGAAGCTTCGGCAAGCTTGTTTCAAAGCAAATTACCGAAGGAGAAGATCATTGGCACTTCAAGTCCAGCACTGA	786	0.4351	MDCYHTDFDLPNFAYPHGFTSYNPTCQHETISEMSPVMGLADMALMVPLPPPYESNEAYSNQLPELENFDFNFAGFDYNDFPSFYDDLVIDEKPRTIVLPNQSQCETFPVQNAQSSSSLLIGNGFRFAPSVKEDETRNRISYNCRKKRSSSLELDEIRKYFDVPITQAAKELNVGLTLLKRRCRELNITRWPHRKIKSLKALIDNVKELGLADEVAMLQKHKKLMEKLPDLELSEETKKLRQACFKANYRRRRSLALQVQH	261

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele25g0962	261	Pfam	RWP-RK domain	152	199	IPR003035	-
	Lele25g0962	261	ProSiteProfiles	RWP-RK domain profile.	128	220	IPR003035	-
	Lele25g0962	261	PANTHER	PROTEIN RKD4	112	258	IPR044607	GO:0003700

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele25g0962	Lele-ChrLele25	6197030	6198156	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele25g0962	22	256	AtRKD Transcription Factor Family	AT5G53040	42.373	8.82e-45	149

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	RWP-RK	Lele25g0962		RWP-RK	1e-22	No_clan