Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0939 ATGAAGAAGCTAAAACGTCATCCGCCGTCGCCCACGGCGGATATAGACACTGATTCCTTAGCCCTGTGCCCTGACACTCTTATGAATTTAAAGAATGCTCGGCTTAGAAGACTTAAAATCCAGCGGTTGAAGTTGAAGTATACTTGTGATGGGAAAATCCATGTCGCCCCCGGTGATCGTGAGGAGGGGACAAAGTGTGCAGAGTCAGAAAGTAAAGATAGAACGATTCATGAATCGATGAAGATATCATTGTCGTTAACGACTTCGTCGTCTAAGGAGGAGGATCGGTTGAGTTTGGCGGAAAACAACTGCGTTCTGGCGGATGCTCTCAGAGGTGAGAAATACAAAGAGGATCTCTGTGATGTGGAGGGTTTATCTTACGGTTTGGTGTCATTGATAGGTAGAAGGAAAGAGATGGAAGATGCGGTTAGCATAGAGGTTGGGTTTGGGCGGAAGGAGAGAACCAAGTGTGACTTCTTTGCAGTCTATGACGGCCACGGTGGGGCCCAGGTGGCGAAAGCGTGCCGGGAGCGATTATACCAATTGGTGGCGGAGGAGTTGGAGCGGCATGGAAGAAATGGTGGCGAAGTGGATTGGGAGGGAATGATGGAAGGGTGTTTTGATAAAATGGACAGAGAACTGGCAGATAATGCGGCGCTACGAACGGTGGGATCTACAGCGGTTGTGGCTGTAGTGACAAAGGATGAGGTGGTTGTGGCCAATTGCGGCGACTGTAGGGCGGTGATGGGAAGAGGAGGTGAGGCTCTCGCCTTGTCTAATGATCATAAGCCTGACAGGCCTGATGAGTTGATGAGAATAGAATCCGCTGGTGGAAGGGTCATAAACTGGAACGGCCAACGTGTTCTAGGAGTTCTTGCCACCTCCAGATCTATTGGAGACCAATACCTTCGACCTTACGTAATATCGAAACCAGAAGTGACGGTGACAAAACGAGCCAACGAGGATGAGTTTCTTATACTGGCGAGCGATGGCTTGTGGGACGTGATCTCTGGTGAAGCTGCGTATGAGGTTGTGAGGAAGTGTCTAAGTGCCCAAGCGAGGCGGCGGAATTCGCGGGAGCTTGAAAATCAAAGCCCGGCCAGTGAGGCCGCAGCTCTGTTAGCTGAACTAGCAATGGCCAAAGGAAGCAGAGATAACACAAGTGTCATCGTAGTTGACCTCAAGAGCCATAATAATAATATTAACTAA 1209 0.4955 MKKLKRHPPSPTADIDTDSLALCPDTLMNLKNARLRRLKIQRLKLKYTCDGKIHVAPGDREEGTKCAESESKDRTIHESMKISLSLTTSSSKEEDRLSLAENNCVLADALRGEKYKEDLCDVEGLSYGLVSLIGRRKEMEDAVSIEVGFGRKERTKCDFFAVYDGHGGAQVAKACRERLYQLVAEELERHGRNGGEVDWEGMMEGCFDKMDRELADNAALRTVGSTAVVAVVTKDEVVVANCGDCRAVMGRGGEALALSNDHKPDRPDELMRIESAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRANEDEFLILASDGLWDVISGEAAYEVVRKCLSAQARRRNSRELENQSPASEAAALLAELAMAKGSRDNTSVIVVDLKSHNNNIN 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0939 402 CDD PP2Cc 126 394 IPR001932 -
Lele25g0939 402 Gene3D - 122 401 IPR036457 -
Lele25g0939 402 SMART PP2C_4 116 392 IPR001932 -
Lele25g0939 402 Pfam Protein phosphatase 2C 127 387 IPR001932 -
Lele25g0939 402 PANTHER PROTEIN PHOSPHATASE 88 394 - -
Lele25g0939 402 SUPERFAMILY PP2C-like 124 396 IPR036457 -
Lele25g0939 402 ProSiteProfiles PPM-type phosphatase domain profile. 126 394 IPR001932 -
Lele25g0939 402 FunFam Protein phosphatase 2C 51 120 402 - -
Lele25g0939 402 ProSitePatterns PPM-type phosphatase domain signature. 159 167 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0939 Lele-ChrLele25 6014283 6016700 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0939 113 395 PP2C-type Phosphatase Gene Family AT2G29380 49.346 4.49e-91 277