Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0930 ATGAAATACATGTTTCTTCTCATTGTGACTTTCAAGATCATCAAGAAGAAGCTAAGCAAGCTGCAAGAGGCAATGGGATTTCAAACCCCCCATTCAAGTAAACCCAAAGTGCAACCTGTAACCAAACCCATTCCCTCGTCCTACGATTCATGGACGGAGAGGCATCCTTCAGCGTTGCGTTCATTTGATAGATTGATGAGAGCAGCAAGTGGAATGGACATGGTTGTGTTTTTAGACTATGATGGCACCTTATCACCTATTGTTAATGACCCTGATAGTGCTTTTATGTCTGACGAGATGCGTGCAGCAGTGTGTGAAGTTGCTAAGAATTTCCCAACTGCAATAATTAGTGGAAGAAGCAGAGACAAGGTTAAAGAATTTGTCAAGTTAAATAATGTGTATTATGCTGGAAGTCATGGGATGGATATAATAACACCATCAGTGACAGCTAGATCTTCTGATAGCGACCACTATAACATGGCCCTCGACACCACAAAGGACAATGGAGTTGCCTTTCAACCTGCCAAGAAATTTTTGCCTGCAATTCGAGAGATATTGAAAGTATTAGAGAATAAGATAAAAGGCATACAAGGTGCAAGGATAGAGGACAATGGATTCTGCATTTCTGTGCACTTCCGGCAAGTTCAAGAAAAGGACTATACTGAATTAGAAGTGAAGGTGAAGTCTGTGCTTGAAGAGCATTCAGACTTTTGCTTAACTGAGGGTAAAAAGGTTCTGGAAATAAGGCCATCCATAGAATGGAACAAAGGTCATGCCCTGGAATATTTTCTGGACACACTAGGGTTAAGCAGTTCCAGCAATATCCTTCCAGTGTACATTGGGGATGATCGAACCGATGAAGACGCTTTTAAGGTGATACAGAAGAGAGGACAAGGTTATCCAATTGTAGTATCTTCAATTCCAAAGGAAACAAAAGCTCTGTACTCTCTCAGAGACCCGTCAGAAGTGCTAATTTTCTTGTCACGTCTGGCGAAATGGAGGAAAACCATTATCGGCTCGAATTAA 1026 0.4142 MKYMFLLIVTFKIIKKKLSKLQEAMGFQTPHSSKPKVQPVTKPIPSSYDSWTERHPSALRSFDRLMRAASGMDMVVFLDYDGTLSPIVNDPDSAFMSDEMRAAVCEVAKNFPTAIISGRSRDKVKEFVKLNNVYYAGSHGMDIITPSVTARSSDSDHYNMALDTTKDNGVAFQPAKKFLPAIREILKVLENKIKGIQGARIEDNGFCISVHFRQVQEKDYTELEVKVKSVLEEHSDFCLTEGKKVLEIRPSIEWNKGHALEYFLDTLGLSSSSNILPVYIGDDRTDEDAFKVIQKRGQGYPIVVSSIPKETKALYSLRDPSEVLIFLSRLAKWRKTIIGSN 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0930 341 CDD HAD_TPP 75 323 - -
Lele25g0930 341 TIGRFAM T6PP: trehalose-phosphatase 75 332 IPR003337 GO:0003824|GO:0005992
Lele25g0930 341 FunFam Trehalose 6-phosphate phosphatase 175 251 - -
Lele25g0930 341 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 19 336 IPR044651 GO:0004805|GO:0005992
Lele25g0930 341 SUPERFAMILY HAD-like 75 336 IPR036412 -
Lele25g0930 341 Coils Coil 213 233 - -
Lele25g0930 341 Gene3D - 74 164 IPR023214 -
Lele25g0930 341 Gene3D - 170 338 IPR023214 -
Lele25g0930 341 FunFam Trehalose 6-phosphate phosphatase 180 338 - -
Lele25g0930 341 Pfam Trehalose-phosphatase 77 321 IPR003337 GO:0003824|GO:0005992
Lele25g0930 341 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 76 294 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0930 Lele-ChrLele25 5966794 5968823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0930 76 331 Trehalose Biosynthesis Gene Families AT1G70290 26.103 6.47e-09 55.5