Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0922 ATGGACGACGGCTTCTCTGATATTTTTGAAGACAAAGACTTGGACTTGGGTGGAGACGATCTGCTTGCCATTTTGGATTCCCTCGAGGACTTGACCAACTTCCCTCCCGTAGAAGAATCCCTTACCGTTACCTCAAACGAGAATAACGATGAAACCACAAGCGCTCTTCAATCTGATGATTCACCAACTCAGCTTGAAACTACAACCCACAAAACCAAGAGACAGAAGCTTTCGGAGTCTTCTGAAGAACCTAAGATATCTCATATCACTGTGGAGCGCAACCGAAGAAAGCAAATGAACGAGAACTTGTCCGTCTTGAGATCCCTCATGCCTTGCTTCTATGTCAAACGAGGCGATCAAGCATCAATAATAGGAGGAACGGTGGAGTACATCAATGAGTTGCAGCAACTTCTGCAATCCCTGGTAGCGAAGAAACAGAGAAAGGTGTATAATGAAGTTCTGAGCCCTAGGCTGGTGTCAAGCCCAAGGGTTTCTCCTAGAGTGACGATGACGCCGGTGAGCCCTAGGTTAAACCTACCGATTAGCCCAGGAACACCACAGCCAGGTAGCCCCTACAAGCCCCAACGGAGATTGTCCACCTCTCTGGAACCATCTCCCACATCTTCTGCTTCTTCCTCCATCAACGACAATATCAACGAGCTCGTCGCAAACTCCAAGTCCCCCATCGCCGACGTGGAGGTTAAGTTCTCCGGGCCCCACGTACTCTTAAAAACTCTATCTCCACCAATCCCTGGACAAGCTTTAAAAATCATCTCCGCTCTTGAAGACCTGGCCCTCGAAATCCTTCAGGTCACCATCACCGCTGCTGAAGAAAGCATACTTAACTCATTCACCATCAAGATTGGAGTTGAATGTCAGCTCAGTGCCGAGGATTTGGCTCAACAAGTGCAGCAAACTTTCTCGCCACACGGGCTTCTCTCATGA 945 0.4857 MDDGFSDIFEDKDLDLGGDDLLAILDSLEDLTNFPPVEESLTVTSNENNDETTSALQSDDSPTQLETTTHKTKRQKLSESSEEPKISHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGTVEYINELQQLLQSLVAKKQRKVYNEVLSPRLVSSPRVSPRVTMTPVSPRLNLPISPGTPQPGSPYKPQRRLSTSLEPSPTSSASSSINDNINELVANSKSPIADVEVKFSGPHVLLKTLSPPIPGQALKIISALEDLALEILQVTITAAEESILNSFTIKIGVECQLSAEDLAQQVQQTFSPHGLLS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0922 314 MobiDBLite consensus disorder prediction 160 214 - -
Lele25g0922 314 MobiDBLite consensus disorder prediction 37 65 - -
Lele25g0922 314 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 82 155 IPR036638 GO:0046983
Lele25g0922 314 MobiDBLite consensus disorder prediction 162 178 - -
Lele25g0922 314 MobiDBLite consensus disorder prediction 35 94 - -
Lele25g0922 314 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 83 134 IPR011598 GO:0046983
Lele25g0922 314 MobiDBLite consensus disorder prediction 192 214 - -
Lele25g0922 314 SMART finulus 89 140 IPR011598 GO:0046983
Lele25g0922 314 Pfam Helix-loop-helix DNA-binding domain 85 135 IPR011598 GO:0046983
Lele25g0922 314 PANTHER TRANSCRIPTION FACTOR FAMA 18 307 IPR044283 GO:0003700|GO:0010052
Lele25g0922 314 MobiDBLite consensus disorder prediction 66 94 - -
Lele25g0922 314 Gene3D - 70 149 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0922 Lele-ChrLele25 5912978 5914866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0922 5 288 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G53210 48.837 1.24e-77 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele25g0922 HLH 3e-10 No_clan