Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0910 ATGTCAAGCAATGCAATAACTCTCGTTATCTTGTTTCTTAATATCTCCTTGTTTCCTTCCGTCTATACTCTGAACCAGGAAGGTCTCTCCCTACTTTCATGGCTTTCAACCTTCAATTCCTCTGATTCTGTTTCTTCCTTCTCTTCATGGAATCCAACCGACAAAACTCCTTGCAAATGGGATTATGTAAGATGTTCCAAAGTTGGGTTTGTTTCAGATATTGTAATAACATCTATCAATCTTCGTAGCAGCTTCCCAACGCAGCTCCTCTCTTTTGGTCACCTCACTACTCTTGTCATCTCAAATGGAAATCTTACTGGTGAGATTCCAAGTTCGGTAGGGAACTTGTCGTCTCTGGTTTTTTTGGAGCTCAGCTTCAATGCTTTCTCAGGTACCATTCCTGCAGAAATAGGAAATTTACCTAATCTGCAGTGGTTAAAATTAAATTCAAATTCCTTACATGGGGAAATTCCAAAAGAAATTGGGAACTGTTCCAAGCTTCGTCAGCTGGAATTGCATGACAACCAGCTCTCTGGCAAGATTCCCGGAGAGATAGGCCATTTAAAAGATCTAGAAATGTTTCGAGCAGGTGGAAACCAGGGAATCCATGGTGAAATTCCAATGCAGATTTCAAACTGCAAAGCTCTCACTTTGCTGGGTCTTGCGGATACTGGGATTTCAGGGGAGATTCCATCAAGTATAGGAGAACTTAAGAATCTCAAGACCCTTTCTGTCTACACAACAAACCTCACAGGCCATATCCCACCAGAGATTCATAATTGCTCAGCCTTAGAGAATTTGTTTCTATATGAAAATCAGCTTTCTGGTAACATTCCTTATGAATTGGGTTCCATGAAAAGCCTGAGGAGAGTAATGCTATGGCAGAACAATTTAACTGGCACCATTCCAGAGAGTCTGGGGAACTGTACAAGTCTGGTGGTTGTAGATTTTTCTTTGAATTCCTTGGAAGGTGAGCTCCCTGTGACTCTTAGAAATTTGCTCTTATTGGAGGAGCTTCTTCTCTCTGATAATAACATTTCTGGAGAAATACCTTCCCTTATTGGCAATTTTTCCATACTGAAGCAGCTTGAATTAGATAACAACAGATTCTCTGGCAAGATTCCACCTGTTATGGGACAGCTGAAAGAACTCACCTTGTTCTTTGCTTGGCAGAACCAACTCTATGGAAGCATACCAACAGAACTATCCCACTGTGAGAAACTTGAGGCAGTTGATCTGTCACACAATTTCCTCACTGGGTCAATTCCAAGTTCTCTCTTTCATCTAGAGAACTTAACTCAACTATTGTTGATATCAAATCGACTTTCAGGTCAACTTCCACCAGATATTGGCAGCTGCACCAACTTGGTCAGGCTACGGCTGGGATCAAACAACCTTACCGGTCCAATTCCACCAGAAATAGGTCTTTTAAGCAGATTGAGCTTTCTTGAGTTGTCAGATAATCTACTCAGTGGAGAAATTCCCGACCAAATTGGCAACTGCAATCAGCTACAAATGCTTGACTTGCACAAGAATCAGCTGCAAGGAACAATTCCTTCCTCCTTTGAATTCCTACTTGTTCTTAATGTCTTAGATCTTTCTACAAACAGAATAACTGGAAGTATTCCACAAAATTTGGACAAGATTACATCTTTAAATAAGCTAATAATCAGTGGCAACAGCATTACAGGTTTGATCCCTCAGTCACTGGGCATTTGTAAGAATCTGCAGTTGCTGGATATTAGCAACAACAGAATCTCTGGTTCCATCCCAGATGAGATTGGCCAATTGCAAGGGCTCGATATCATCTTGAACTTGAGTTGGAACTCTCTAACAGATCCCATTCCAGAGAGCTTCTCAAATCTCTCAAAACTTTCCAACTTGGACCTCTCCCACAACAGCCTAACAGGCAACCTCAGAATACTGAGTAGTCTTGACAATTTAGTGTCTTTGAATGTCTCCTACAATAGTTTTTCTGGTTCACTTCCAGATACAAAGTTCTTTCATGATCTCCCTCCTGCTGCATTTGCTGGTAACCCTGAGCTCTGCATTAGCAGGTGTGACATGCATAGAAATCACCAAGGCATCAAGTCAGTACGAAATGTTATTATTTACACTTTTCTAGGTGTTATTTTAACAGCTATGTTTGTGACTTTTGGAGTAACTTTTGCTCTGAGAATTCACGGGGCCACTTTTGAGAGGGAATTCGATGAAGAAAGTGAAATGGAATGGACTTTTACTCCATTTCAAAAACTTAACTTCTCCATCAATGACATTGTCACAAAGTTATCAGATTCAAACGTTGTAGGAAAGGGTTGCTCAGGGATTGTTTATCGAGTAGAGACTCCAATGAAACAAATAATTGCAGTGAAGAAGCTCTGGCCAATAAAGAATGACGAGCCCCCGGAGAGAGACTTGTTTTCTGCAGAGGTTCAGACCTTGGGATCAATAAGACATAAAAATATAGTCAGGCTTCTAGGATGCTGTAACAATGGAAGAACGAGGTTACTCCTATTTGATTATATCAGCAACGGGAGTTTGTGTGGGTTGCTACATGAAAAGAGGTTGTTCTTGGATTGGGATGCAAGGTATAAGATCTTACTGGGAGCAGCTCAAGATTTTGGTCTTGCAAAACTGGTGAATTCCTCTGAGTGTTTGATACAACCTGATTCCGCCACAGACAATAGCAACACTAATACGGCAAATCTGAATGGAACTGATATGATATTAATGAGAGACAAAGGGGATTTCAGTCATGAGATTACACCAGCAATCCTGATCACCCCGAAATCAAAATACAGATTGGGCACAGCACAAGGAGGTTAA 2826 0.4091 MSSNAITLVILFLNISLFPSVYTLNQEGLSLLSWLSTFNSSDSVSSFSSWNPTDKTPCKWDYVRCSKVGFVSDIVITSINLRSSFPTQLLSFGHLTTLVISNGNLTGEIPSSVGNLSSLVFLELSFNAFSGTIPAEIGNLPNLQWLKLNSNSLHGEIPKEIGNCSKLRQLELHDNQLSGKIPGEIGHLKDLEMFRAGGNQGIHGEIPMQISNCKALTLLGLADTGISGEIPSSIGELKNLKTLSVYTTNLTGHIPPEIHNCSALENLFLYENQLSGNIPYELGSMKSLRRVMLWQNNLTGTIPESLGNCTSLVVVDFSLNSLEGELPVTLRNLLLLEELLLSDNNISGEIPSLIGNFSILKQLELDNNRFSGKIPPVMGQLKELTLFFAWQNQLYGSIPTELSHCEKLEAVDLSHNFLTGSIPSSLFHLENLTQLLLISNRLSGQLPPDIGSCTNLVRLRLGSNNLTGPIPPEIGLLSRLSFLELSDNLLSGEIPDQIGNCNQLQMLDLHKNQLQGTIPSSFEFLLVLNVLDLSTNRITGSIPQNLDKITSLNKLIISGNSITGLIPQSLGICKNLQLLDISNNRISGSIPDEIGQLQGLDIILNLSWNSLTDPIPESFSNLSKLSNLDLSHNSLTGNLRILSSLDNLVSLNVSYNSFSGSLPDTKFFHDLPPAAFAGNPELCISRCDMHRNHQGIKSVRNVIIYTFLGVILTAMFVTFGVTFALRIHGATFEREFDEESEMEWTFTPFQKLNFSINDIVTKLSDSNVVGKGCSGIVYRVETPMKQIIAVKKLWPIKNDEPPERDLFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLCGLLHEKRLFLDWDARYKILLGAAQDFGLAKLVNSSECLIQPDSATDNSNTNTANLNGTDMILMRDKGDFSHEITPAILITPKSKYRLGTAQGG 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0910 941 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Lele25g0910 941 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Lele25g0910 941 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 24 199 - -
Lele25g0910 941 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 200 325 - -
Lele25g0910 941 SUPERFAMILY L domain-like 286 668 - -
Lele25g0910 941 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 739 841 - -
Lele25g0910 941 ProSitePatterns Protein kinases ATP-binding region signature. 769 797 IPR017441 GO:0005524
Lele25g0910 941 Gene3D Ribonuclease Inhibitor 389 692 IPR032675 -
Lele25g0910 941 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 407 692 - -
Lele25g0910 941 PANTHER RECEPTOR-LIKE PROTEIN 55 432 878 - -
Lele25g0910 941 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Lele25g0910 941 Gene3D Transferase(Phosphotransferase) domain 1 753 900 - -
Lele25g0910 941 ProSiteProfiles Protein kinase domain profile. 763 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0910 941 PRINTS Leucine-rich repeat signature 576 589 - -
Lele25g0910 941 PRINTS Leucine-rich repeat signature 622 635 - -
Lele25g0910 941 SUPERFAMILY L domain-like 38 395 - -
Lele25g0910 941 SMART LRR_typ_2 116 139 IPR003591 -
Lele25g0910 941 SMART LRR_typ_2 140 164 IPR003591 -
Lele25g0910 941 SMART LRR_typ_2 645 678 IPR003591 -
Lele25g0910 941 SMART LRR_typ_2 477 501 IPR003591 -
Lele25g0910 941 SMART LRR_typ_2 333 357 IPR003591 -
Lele25g0910 941 SMART LRR_typ_2 285 309 IPR003591 -
Lele25g0910 941 SMART LRR_typ_2 429 453 IPR003591 -
Lele25g0910 941 SMART LRR_typ_2 573 597 IPR003591 -
Lele25g0910 941 Pfam Protein kinase domain 766 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0910 941 Pfam Leucine Rich Repeat 603 622 IPR001611 GO:0005515
Lele25g0910 941 Pfam Leucine Rich Repeat 575 595 IPR001611 GO:0005515
Lele25g0910 941 Pfam Leucine Rich Repeat 407 429 IPR001611 GO:0005515
Lele25g0910 941 SUPERFAMILY Protein kinase-like (PK-like) 745 885 IPR011009 -
Lele25g0910 941 ProSiteProfiles Leucine-rich repeat profile. 575 597 IPR001611 GO:0005515
Lele25g0910 941 Gene3D Ribonuclease Inhibitor 24 181 IPR032675 -
Lele25g0910 941 Gene3D Ribonuclease Inhibitor 280 380 IPR032675 -
Lele25g0910 941 Gene3D Ribonuclease Inhibitor 182 279 IPR032675 -
Lele25g0910 941 ProSiteProfiles Leucine-rich repeat profile. 624 646 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0910 Lele-ChrLele25 5816681 5819608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0910 22 872 Receptor kinase-like Gene Family AT5G56040 46.181 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele25g0910 Pkinase 1e-10 CL0016