Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0907 ATGATTGCGGATGCAAGGTCCTTGTGCAAGTCCGTTTCAGGTATGGACATCAACAGTGAGGAGGAAGATGGAGAATTCGAATTCTCAAGAAACTATTTTCTGGCAAAGGAATTGGGCTCCTCGAGCAAGAAATCAACTCACAAGCTTTCCGACATTGACATTGTTGATGAACAGGAATTGAGGACTGCAGCAGCCAATATTGAGCCCAAGCATGAGAAGGAGATTACCGCATTAATTGATGGTTATAAAAATATGTATTCTGAATGGGTTTTTGCCCTGAGGTGTGATTTTTCCTTGCTAATGCATGGCTTTGGGTCTAAGAAGGCTGTACTTGAAGATTTTGCTTCGACTGCATTGGCTGAACATTCTGTAATTGTTATCAATGGTTATCTTCCAACCATTAACTTAAAACAGGTCCTGATAGCTTTAGCTGAAGTGTTATCGGATCAAGTAAAAACTAAACAGAAGGGTTTCAAAAGTGAGCAGCCATTCAGTTCTCAATCCATGGAAGACCTTCTTGCATTTTTGGATGGAGCAGAAACAGAGGAAGATTGTTTTGTTTGTGTTGTCATTCACAATATTGATGGGCCTGGATTAAGAGACTCTGAAACCCAACAATATCTTGCTCGACTAGCTGCTTGTTCCCATGTTCGTATTATTGCCTCAATTGACCATTTAAATGCTCCTCTTCTCTGGGACAAGAATATGGTTCACAGACAATTTAATTGGTGCTGGTATCACGTCCCCACCTTTGCCCCATACAAGGTTGAAGGCATGTATTATCCTTTGATTCTCGCTCAGGGTGGTTCCAATCAAAGCGTTAAAACAGCTGCAATAGTATTGCAAAGTTTGACACCCAATGCCCAGAGTGTATTTAAAGTTCTTGCAGAACACCAACTCTCTCATCCTGATGAGGAAGGCATGCCAATCAGTGATCTTTACTCAGTCTGTCGGGAACGCTTCCTTGTAAGCAGTCAGGTTACCCTGAACTCCCACTTAACTGAGTTTAAAGACCATGAATTGATCAAGATTAGGAGGCATTCCGATGGTCAAGATTGCTTATACATTCCTCTGGCAGCTGAAGCACTCCAGAAGGTGTTGCTGGAGATCAATCAATAG 1119 0.4191 MIADARSLCKSVSGMDINSEEEDGEFEFSRNYFLAKELGSSSKKSTHKLSDIDIVDEQELRTAAANIEPKHEKEITALIDGYKNMYSEWVFALRCDFSLLMHGFGSKKAVLEDFASTALAEHSVIVINGYLPTINLKQVLIALAEVLSDQVKTKQKGFKSEQPFSSQSMEDLLAFLDGAETEEDCFVCVVIHNIDGPGLRDSETQQYLARLAACSHVRIIASIDHLNAPLLWDKNMVHRQFNWCWYHVPTFAPYKVEGMYYPLILAQGGSNQSVKTAAIVLQSLTPNAQSVFKVLAEHQLSHPDEEGMPISDLYSVCRERFLVSSQVTLNSHLTEFKDHELIKIRRHSDGQDCLYIPLAAEALQKVLLEINQ 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0907 372 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 2 23 371 IPR007220 GO:0000808|GO:0005634|GO:0006260
Lele25g0907 372 Pfam Origin recognition complex subunit 2 45 361 IPR007220 GO:0000808|GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0907 Lele-ChrLele25 5800063 5803013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0907 26 372 Core DNA Replication Machinery Family AT2G37560 65.517 4.97e-180 501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0907 25 5800063 5803013 Lele27g1171 27 18881278 18883695 hybridization
Lele25g0907 25 5800063 5803013 Lele28g0896 28 5781445 5782497 hybridization