Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0906 ATGGTGATTCCTAAACTATCCTATGAGGAGAGCCGCCGCAAAAGATTGGAGGAGAACAAGAAGCGAATCGAAGCCCTTAATTTGGCCCAGCTTTCTCAGGCCCTCCGAAATTCCCCTTCTCCCAAACCCTCCCCTATGAAGCACACCAAACCTCGCTCAACGGAAAAACAGATTGCTGTCGTAAGGAGGTCTAGCCGTGTCGCAAACAGGCCTGCTCCTGTTTACAAAGAAGTAAGCTTTTTCCACGATTCCATTTCCCATTTATGGTTTCTAGTTTACCCTCCATCCTATTGCATTGTGGTCTTTCATGTTCGTCAGGTGCTTATTGATCGCGTGGCAATACCTAGAAGAGTTTATGGGAAGCGAAGAAATTTATCAAACTGCGTACATGCTTCAGAGGAAGCCAGGGAGGAAGCTTTTGAAAAAGCTGAGAAGCTACTCTTTGATTTAGAATCTGAATATCCGACATTCATAAAGTCAATGCTTCCGTCGCATGTAAGCGGGGGGTTTTGGCTGGTAAGTGGTAATGTTCTGGGTCTTTCAGTCCAGTTCTGCAAGAGTAACCTTTCAAAGAGGGACGAAGTGATTACTTTGATAGATGAAGATGGGGGTGAGTATCCCACAGTGTACTTGGCTCGTAAAACTGGACTCAGCGGTGGATGGAAAGGTTTTGCGGTTGCTCATAACCTAGCTGATGGGGACGCATTAGTTTTTCAGTTGATCGGACCTACATCATTCAAGGTGACGATGCAAGATTTACTTTCGATTAATTTAGGCCTTCCTTTGACCTTGATCCTATCAATTGTTCTAAAGGCTAATTCACGGTTATAG 831 0.4477 MVIPKLSYEESRRKRLEENKKRIEALNLAQLSQALRNSPSPKPSPMKHTKPRSTEKQIAVVRRSSRVANRPAPVYKEVSFFHDSISHLWFLVYPPSYCIVVFHVRQVLIDRVAIPRRVYGKRRNLSNCVHASEEAREEAFEKAEKLLFDLESEYPTFIKSMLPSHVSGGFWLVSGNVLGLSVQFCKSNLSKRDEVITLIDEDGGEYPTVYLARKTGLSGGWKGFAVAHNLADGDALVFQLIGPTSFKVTMQDLLSINLGLPLTLILSIVLKANSRL 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0906 276 Coils Coil 6 26 - -
Lele25g0906 276 Pfam B3 DNA binding domain 157 249 IPR003340 GO:0003677
Lele25g0906 276 ProSiteProfiles B3 DNA-binding domain profile. 178 254 IPR003340 GO:0003677
Lele25g0906 276 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 32 250 IPR044837 -
Lele25g0906 276 CDD B3_DNA 155 249 IPR003340 GO:0003677
Lele25g0906 276 Gene3D - 131 253 IPR015300 -
Lele25g0906 276 SUPERFAMILY DNA-binding pseudobarrel domain 151 251 IPR015300 -
Lele25g0906 276 SMART B3_2 157 254 IPR003340 GO:0003677
Lele25g0906 276 MobiDBLite consensus disorder prediction 33 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0906 Lele-ChrLele25 5793495 5794788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0906 47 248 B3 DNA Binding Superfamily AT5G42700 50.246 7.68e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele25g0906 B3 1.5e-11 CL0405