Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0903 ATGCAAGTGGTGGGGAGGCTAGGCAGCTACATTAGTCGGGGTGTATCCACGGTGTCAGGTTCCGTTCGTCCACTTGGTGGCGCTGTAGATATTGTTTTAGTTGAACAGCAAGATGGGAGCTTCAAGTCGTCGCCTTGGTACGTCCGCTTTGGGAAGTCCCATGTCGTTTTAAGGACAGAAGAGAGGATGATCAGCATTAATGTCAATGGAGAGGAAGCAAATTTCCATATGTATATGGATCATAAAGGGCAAGCCTTCTTTCTCAGGGAGGTCGATGCGGAAGAGGGAGAATCTACGTTGTATCCATTATCTTCTGGGGATGAGACAGATATTCTGGATAAGCGGCATATGAAGTCCAGAAGTTTTAGTTTCGAAGATAAAACAAATTATATGGCTCAGGGTGATATGATCACAGGAAGCATGCTGGCCAGAACTACTTCTGATGGATCAATGACAAGTGGGCTTTTCATTGCCGACAATAATTTTCAGCGGGGGGTTTTCAATGCTGACATGAACAATGCACTTCCATTGGAGTGTGCTGAGCTAGCAGCCAACCTGTTGGAGGTAAAGTGGTCTACTAATCTTGCTGGTCATAAACCACCTCGAAAAGATCGTGTAAAATTTCAAAAGAGAAAATCTCAGCGTGATATGGAGAATTCTTCAGACCAACGTAGATTCTATGATGAAGCTTGTTCCAACCCAGACCTTGAAGTTCCTGGAGGATTTAATGAGGATAACGGTATGTGCTCATCATGTTCAAGCACCACGATTGAAGTTATCTTTTCAGAACAGAAAACTGAAGTGATAACTGAACTACCAAAGAGTTGTGATATTGCAGGGGACACCGAACATGACAGGAAAATGAAGGAAGTTATAACTGATAGAACCGTCAGTGATTTGGAAGTCACACGTCTCCAACATGAAGATAGCATTGAAAAGAAGCAGTTGAGTGGAGAAGATGTTTCTGGTGTAAGAATAATGCCAGGTTGTGGAATTTCAGAGGAAGAGATTCCACCTGATGGAGGTCAACCACTAGTTTATAGTGGAATGTCAAAGAGTTCAATTGGATGCGTGCATTTTACCACTGAACAAACTCATGAGGTGTTGTACCTTGATAACAAAATAGGTGAAGCACATACTCATGCAGAGATTTTACAAGCTACAACAGTGCTACCTGAGGTTACAAAAAATGAGGAAGTCACCGAAAATGCTGATGTCATGATGCCTGTAATGATGGTTTCTCAGACTTCTCAGCAAGCAAATTGTGCTCATCGTGGTATTAGCAAGTCTACTGTGGCAGATATTGAAGGCCAAACGGCACTGCCAAAAACTCAAACGATCAATCTGGATATTGGACTTTGTTCAATTGAGAAGGGTGGATCAAATTGTGTTGCTGCTACTTCACAGGACTCAGCATGCGATATCTTGAAGCAGCCATTTGGGAAAGATTATGTGAAATGTCTAAAACCAGATGACCAAGTATTACCTGAGGAATCAAGTTTCAAGGACAACAGTAATTTAGGGGATGTTAAGAGTACAGCTACAAATCTTCCACTTGATGCCTCATCAGCACACAAGCCTTCCCCCAGTGGGAACTGGAAGACTTGGCCTTTCTCTTTCAGGAGATCAAGTTCTGAAAAGGTCGCGGTGCCTGCTGTTGATGACAAAGTAACTAATGCTTCAGAGAGTTCAATCAACAAAGATGCAGACGAAAATGAGCTCAAACCCAAGCTAATGAAAAAGAAGGTCAGGGTAAAGACACCAACTGCTGAACAGTTGGCCTCCTTGAATCTAAAGGAAGGGAGGAACACTGTAACCTTCACCTTCACTTTCTCCATGGATACGCTGGAGAATGAACAGATTGATGCCCAAATATTTGTATGGAAATGGGACAATCGTATAGTTATCTCAGATGTGGATGGGACGATTACAAAGTCAGACGTTCTAGGTCAGGTCATGCCTTTAGTAGGAGTAGATTGGTCCCAGACAGGTGTTACACATTTATTCTCAGCTATCAAGGAAAATGGCTACAAACTACTTTTTCTCAGTGCTCGATCAATTTCTCAGGCCTATCAAACCAGACAATTCCTGATTAATCTTAAGCAGGTGATGATGCTTAGAAGTCAAAGATCGAATATCAAAGCACTTTTTCCTCCTGAAAGCAACCCATTTTATGCTGGGTTTGGAAATAGAGATACTGATGAGATCAGCTACCTCAAAGTTGGAATCCCAAGAGGGAAAATCTTCATTATTAATCCAAAGGGAGAGGTTGTTGTGAACCGCCAACATGACACAAAATCTTATACTTCGCTTCATGCTCTCGTGAATGGGATATTCCCTCCTTCTACGAATACGAACACATCTGAGCAGTTGACTGTAATGGTTTTGAGAGACAACTCGAGTGAATCCTTCATGACGTTGTCCAGAGTGCAGGACTCTGGTAAATTTCGGAAAATTGCGGAACTGTGTCCTAAAGAACAAAATGAATTGAGACAAGAAACGCAGAAGAGAGAAACTTCAGAACCTAGTGATCCTGATGTTGAAATGCTTGTCAGCAAAGGGGGCAAGATTTCTGAATTCGCTGTCATCAATGAAGCCATTGTGGTTAGCGTCTGCAGATTCAACGCCCCTTTTGCACTTCCAGGCAGCAAAAACCCCACCGCCGCTGAGCCGCACGGCCTCTCTGAGTTCAGAATGGCTGATTCTGCCGTCGCCGTTAGAATCAAATCTCCTCAGCCACCGCTTGAACTCCTCCACACTCATCATTCTCTTCCCGTTGCTGGTCACTACACCTCGACAGCTCCTCCCCTTTATACTTCTTCATGGTATCGTATCTACAATGAACAGATCCAAGCTGTCTCTAAAATTCTAAAGTTCTGTGAAGAACTTTAA 2892 0.4305 MQVVGRLGSYISRGVSTVSGSVRPLGGAVDIVLVEQQDGSFKSSPWYVRFGKSHVVLRTEERMISINVNGEEANFHMYMDHKGQAFFLREVDAEEGESTLYPLSSGDETDILDKRHMKSRSFSFEDKTNYMAQGDMITGSMLARTTSDGSMTSGLFIADNNFQRGVFNADMNNALPLECAELAANLLEVKWSTNLAGHKPPRKDRVKFQKRKSQRDMENSSDQRRFYDEACSNPDLEVPGGFNEDNGMCSSCSSTTIEVIFSEQKTEVITELPKSCDIAGDTEHDRKMKEVITDRTVSDLEVTRLQHEDSIEKKQLSGEDVSGVRIMPGCGISEEEIPPDGGQPLVYSGMSKSSIGCVHFTTEQTHEVLYLDNKIGEAHTHAEILQATTVLPEVTKNEEVTENADVMMPVMMVSQTSQQANCAHRGISKSTVADIEGQTALPKTQTINLDIGLCSIEKGGSNCVAATSQDSACDILKQPFGKDYVKCLKPDDQVLPEESSFKDNSNLGDVKSTATNLPLDASSAHKPSPSGNWKTWPFSFRRSSSEKVAVPAVDDKVTNASESSINKDADENELKPKLMKKKVRVKTPTAEQLASLNLKEGRNTVTFTFTFSMDTLENEQIDAQIFVWKWDNRIVISDVDGTITKSDVLGQVMPLVGVDWSQTGVTHLFSAIKENGYKLLFLSARSISQAYQTRQFLINLKQVMMLRSQRSNIKALFPPESNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVVVNRQHDTKSYTSLHALVNGIFPPSTNTNTSEQLTVMVLRDNSSESFMTLSRVQDSGKFRKIAELCPKEQNELRQETQKRETSEPSDPDVEMLVSKGGKISEFAVINEAIVVSVCRFNAPFALPGSKNPTAAEPHGLSEFRMADSAVAVRIKSPQPPLELLHTHHSLPVAGHYTSTAPPLYTSSWYRIYNEQIQAVSKILKFCEEL 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0903 963 MobiDBLite consensus disorder prediction 198 226 - -
Lele25g0903 963 MobiDBLite consensus disorder prediction 826 848 - -
Lele25g0903 963 Pfam lipin, N-terminal conserved region 1 96 IPR007651 -
Lele25g0903 963 MobiDBLite consensus disorder prediction 210 226 - -
Lele25g0903 963 MobiDBLite consensus disorder prediction 826 844 - -
Lele25g0903 963 Pfam LNS2 (Lipin/Ned1/Smp2) 587 702 IPR013209 -
Lele25g0903 963 Pfam LNS2 (Lipin/Ned1/Smp2) 711 780 IPR013209 -
Lele25g0903 963 PANTHER LIPIN 1 702 IPR026058 -
Lele25g0903 963 MobiDBLite consensus disorder prediction 499 532 - -
Lele25g0903 963 SMART lns2 634 760 IPR031315 -
Lele25g0903 963 MobiDBLite consensus disorder prediction 496 532 - -
Lele25g0903 963 SUPERFAMILY HAD-like 628 746 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0903 Lele-ChrLele25 5771105 5777581 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0903 25 5771105 5777581 Lele01g0863 01 4980702 4986524 CCT
Lele25g0903 25 5771105 5777581 Lele02g0845 02 5133019 5139505 CCT
Lele25g0903 25 5771105 5777581 Lele03g0858 03 5001231 5007770 CCT
Lele25g0903 25 5771105 5777581 Lele04g0862 04 5271318 5277665 CCT
Lele01g0873 01 5041698 5044831 Lele25g0903 25 5771105 5777581 CCT
Lele03g0869 03 5063928 5067063 Lele25g0903 25 5771105 5777581 CCT
Lele25g0903 25 5771105 5777581 Lele27g1175 27 18904952 18911556 hybridization
Lele25g0903 25 5771105 5777581 Lele28g0891 28 5749654 5755111 hybridization