Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0898 ATGTCATTGGCAGATCTACCTAAAGAAAATAATGAAGCAATAAACTTGATTGATGGAAAGGGGGAATATGGGACTCATTTGCAAGTGACTGAATCTTCTAAATTAGGAACTCCACAAGATGCTCGTGAAGTTCAGACTGTAGGAAAAGATGAGATTCTGCTTGTGGATGATTCAGCGTCAACCTCAAATAGTGATGGAAAAGAGGAATCTACGATTCATATGCCAGTGCTTGAATTCTCCAAATTAGCGACATCACCAAATGCTTCTGCCAGTCAAAATGAAGGACAAGATGAACCAGCTTCAACCTCAACCGGTAATGGAAGAGAGGAATCTGGGAGTAATTTTCTGGTTACAGAACTCTCAGAATTTGCAGCGCCACAAAATGCTTCTGATGCTCAGACTATAGGACAAGATGAAATTCTTCCTGTAGATGGTTCAGCTTCAAAATCAAATGGTATGGTTGGCAAGACCGAAAGAAGCAACGATGGGACTGTGGTTGAAAATTCTAAACCAGAAGCTGTAGAGAATATTTCTGATTTGCAGAAATCCCAAGATGGCTGTTCGACTGTCTCTGTTGATGCTGATGTTGATAATCAGATTATCCACTCACCTTCTGCGTCTGCTCATGCTGTGCAGCCCAATGCTAACAGAGGCCTTATTGATACAGCAGCCCCTTTTGAATCTGTTAAGGAAGCTGTTTCCAAGTTTGGAGGAATTGTGGATTGGAAGGCTCATAGAATTCAGACTGTGGAGAGACGCAAGCTTGTCGAACAAGAACTTGAAAAGGCTTATGAGGAGATCCCTGAGCTCAGAAAACAGTCACAGGCTGCTGAAGGGGCAAAAACACAAGTACTGACGGAGTTGGACAGCGCTAAAAGACTAACAGAAGAGCTAAAACTCAACCTAGAGAGGGCACAAACCGAAGAGCATCAGGCACGACAAGATTCAGAACTTGCAAAACTTAGAGTGGAAGAGATGGAGCGGGGTATTGCAGATGAATCTAGCATTGCAGCCAAGGTACAACTTGAGGTTGCTAAAGCTAGGCATGCTGCTGCTGTTTCAGACCTACAATCCGTCAAAGAAGATCTGGATGTGCTGCGCAAGGAATATGCTTCTTTAGTGACTGAAAAGGATGTGGCTGCTAAGAAGGCTGAAGAGGCTGTTGCTGAATCTAAGGAAGTAGAGAAGACGGTGGAGGATTTGACTATTGAACTGATTGCCACAAAGGAGTCATTGGAGTCTGCTCATGCAGCACACTTGGAAGCAGAGGAACAAAGAATAGGAACAGTCATGGCCAGGGATCAAGATTCTCTCAATTGGGAAAAAGAACTCAAACAGGCAGAAGAGGAACTCCAGAGACTAAACCAGCAAATTTTGTGTGCAAAGGACCTGAAATGTAAACTGGACACTGCATCTGCTTTGCTTCTTGATTTGAAAGCTGAATTAGCTTCATATATGGAAACAAAATTAAAGCAGGAAGGCAGTGAAGAAGGAATCTCAAAAGGAGACCTAGAGGAACCAGAGAAGAAGAATCATAATGAGATACAAATAGCAGTAGCATTGGCGATAAAGGAACTCGAGGAAGTAAAGATAAGCATAGAGAAAGCAACTGCTGAGGTTAATTGCTTGAAAGTGGCTGCCGCATCATTAAAAACAGAACTTGAACAAGAGAAATCAGGTCTTGCTAACATTGGGCAAAGAGAGGGGATGGCCTCCGTTGCAGTTGCATCTCTCAAGGCTGAATTGGACAAAACTAGATCAGAAATAGCTTTGACCCAGATGAAAGAGAAAGAAGCCAGGGAGAGAATGATTGAGCTTCCCAAAAAACTACAACAAGCAGCTGAAGAAGCTAATCAGGCCAATTTGCTTGCCCAAGCAGCTCGTGAAGAGCTTCGGAAAGTGAAGGAGGAGGCAGAACAAACTAAGGCTGGAGCAACTACCACGGAAAGTAGATTACTTGCAGCTCAAAAGGAGATAGAGGCTGCTAGGGCTTCTGAAAGATTGGCAATAGCAGCAATTAAAGCATTGCAAGAGAGTGAATCAGCCAGAACCAAAAATGAATCAGATTCAATTGCTGGCGTGACTCTTTCTCTTGAAGAGTACTATGAGCTTAGCAGACGGGCCCATGAGGCAGAAGAGCAAGCCGATATGAGGATTGTAGATGCTAATTCTCAAATTGCGATAGCTAGGGAGTCTGAATTGAAAACCCTGGAAAAATTGGATGAAGCTAATAAGGAGATGCTTGCCGGAAGGGAATCTTTGAAGATAGCAATGGGTAAAGCTGAGAAAGCAAAGGAAGGGAAATTAGGTGTAGAACAAGAATTAAGAAAGTGGAGGGCTGAACATGAGCAACGAAGAAAGGCTGGTGGATTTGACCAGGGAGTGGCAAACCAGAATAAAAGCCCCAGAGCTAGTATGGAGGGCAATAAGGAAGCAAATAACTTGCACCGAGCTCCCAGTTCAGATAATCCTGATCATTACATGTCAAGCCCAAATGATTATGCACATGCAAACAACGCTGAAAATGGATCATTCCCAGATGCAAGAGTTGGAAAGAAGAAAAAGAAATCAATTCTCCCACGTGTTTTAATGCTCTTCGCCAGGAGGAGATCACCTACGACCAAGTCAGGGTAA 2634 0.4336 MSLADLPKENNEAINLIDGKGEYGTHLQVTESSKLGTPQDAREVQTVGKDEILLVDDSASTSNSDGKEESTIHMPVLEFSKLATSPNASASQNEGQDEPASTSTGNGREESGSNFLVTELSEFAAPQNASDAQTIGQDEILPVDGSASKSNGMVGKTERSNDGTVVENSKPEAVENISDLQKSQDGCSTVSVDADVDNQIIHSPSASAHAVQPNANRGLIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKLVEQELEKAYEEIPELRKQSQAAEGAKTQVLTELDSAKRLTEELKLNLERAQTEEHQARQDSELAKLRVEEMERGIADESSIAAKVQLEVAKARHAAAVSDLQSVKEDLDVLRKEYASLVTEKDVAAKKAEEAVAESKEVEKTVEDLTIELIATKESLESAHAAHLEAEEQRIGTVMARDQDSLNWEKELKQAEEELQRLNQQILCAKDLKCKLDTASALLLDLKAELASYMETKLKQEGSEEGISKGDLEEPEKKNHNEIQIAVALAIKELEEVKISIEKATAEVNCLKVAAASLKTELEQEKSGLANIGQREGMASVAVASLKAELDKTRSEIALTQMKEKEARERMIELPKKLQQAAEEANQANLLAQAAREELRKVKEEAEQTKAGATTTESRLLAAQKEIEAARASERLAIAAIKALQESESARTKNESDSIAGVTLSLEEYYELSRRAHEAEEQADMRIVDANSQIAIARESELKTLEKLDEANKEMLAGRESLKIAMGKAEKAKEGKLGVEQELRKWRAEHEQRRKAGGFDQGVANQNKSPRASMEGNKEANNLHRAPSSDNPDHYMSSPNDYAHANNAENGSFPDARVGKKKKKSILPRVLMLFARRRSPTTKSG 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0898 877 Coils Coil 384 404 - -
Lele25g0898 877 Coils Coil 356 376 - -
Lele25g0898 877 MobiDBLite consensus disorder prediction 150 167 - -
Lele25g0898 877 MobiDBLite consensus disorder prediction 1 168 - -
Lele25g0898 877 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 218 847 - -
Lele25g0898 877 Coils Coil 610 648 - -
Lele25g0898 877 Pfam Weak chloroplast movement under blue light 217 785 IPR008545 -
Lele25g0898 877 Coils Coil 519 553 - -
Lele25g0898 877 Coils Coil 253 280 - -
Lele25g0898 877 MobiDBLite consensus disorder prediction 779 877 - -
Lele25g0898 877 MobiDBLite consensus disorder prediction 82 135 - -
Lele25g0898 877 Coils Coil 437 481 - -
Lele25g0898 877 Coils Coil 288 315 - -
Lele25g0898 877 Coils Coil 575 595 - -
Lele25g0898 877 MobiDBLite consensus disorder prediction 26 40 - -
Lele25g0898 877 MobiDBLite consensus disorder prediction 794 839 - -
Lele25g0898 877 Coils Coil 761 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0898 Lele-ChrLele25 5745443 5748503 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0898 25 5745443 5748503 Lele01g0861 01 4969567 4972831 CCT
Lele25g0898 25 5745443 5748503 Lele02g0841 02 5113822 5117121 CCT
Lele25g0898 25 5745443 5748503 Lele03g0856 03 4989269 4992533 CCT
Lele25g0898 25 5745443 5748503 Lele04g0858 04 5247846 5251121 CCT
Lele25g0898 25 5745443 5748503 Lele27g1181 27 18935644 18938710 hybridization
Lele25g0898 25 5745443 5748503 Lele28g0887 28 5723233 5726609 hybridization