Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0887 ATGAATGAATCGTGCACGGCCAGGATTCTTCGATGGAAAAAAGTGGGAGCTGATTGGGTGGAGATCACATCATTAACCACTAAGGACATTCGACACTTGGCGCCTCTCCCCATTCACCCGCCTTCCCCTATCCAATTTTTATCCTTTTCCTCCCCAAATTTAGAACTTATACTAAGATTTTACCGAACTGGGAGTAAAATGAACTTCGGAAACGACCATGGAGGCGGAAACTCCGGCGGCGGAAGGCCACCGGCAAATTATCTGCTGGCACGACAACCGTCAGTCTACTCCTTGACATTCGATGAGTTTGTGAATACTATGGGAGGTTCGGGAAAGGACTTTGGGTCGATGAACATGGATGAGTTGCTCAAGAACATCTGGAGTGCTGAAGAGGTTCAAACAATGGCTTCCTTGAGTGGTGTTCAACAGGGTGGAAGTGCCTCTGGTGGGCATTTGCAGAGACAAGGCTCCTTGACGTTGCCGCGAACACTTAGCCAGAAAACCGTAGACGAGGTTTGGAAGGATATTTCCAAGGACTATGGTGCGGCGGGGAAGGATGCTCCAAACGTGCCACAGAGGCAGCAGACTTTGGGAGAGATGACGTTGGAAGAGTTCTTGGTGAGAGCCGGGGTTGTCAGAGAAGACGCACAAGCACAATTGATAGGAAAGCCAAATGGTGGGGATTTCCCCGATTTATCTCGTACTGGAAATAATAATGTTATAGGATTGAGTTTTCAGCAGATGAATATGGGTACAGGCTTAATGGCAAACCAAATTACTGGGAATAATGACCAACTATCTCTTCAGTCTCGCACCAATTTGCCATTGAATGTAAACGGTGCTAGATCGAATCAGCAACAGCTGCCGAATTCTAAGTCAACGCAGCCCCAGATATTCCCTAAGCAGCCTGCCATGCCTTATGCGGGTCAGATACCATTAACGAACAATACCCAGTTAGGTAATCAGGGAATGAGAGGTGGAATGGCGGGGATTGTGGATCAGGGTCTGAATGGTAATCTGGTTCAGAGTTCTGCACTGCAAAGTGGAGGGATGGGTATGGTTGGTTTAGGACCTGGGGCTGTTCGCGTAGCTAAAGGATCACCAGCTAATCAGCTGTCTTGCGATGAAATGGGAAAGAGTAATGATGACACTTCGTCAGTGTCGCCACTTCCTTATGCGTTCAATGGTGGTTTAAGAGGGAGGAAAAGCAGTGGGGCTGTGGAAAAGGTTATTGAGAGGAGGCAGAGGAGAATGATCAAGAATAGAGAGTCTGCTGCTAGGTCCCGGGCTCGCAAGCAGGCCTATACCATGGAATTGGAGGAAGAAGTTGCAAAGTTAAAAGAGGAGAATGAAGAACTTAGGAGGAAGCAGGCAGAAATCATGGAAATGCAAGAGAATCAAGTAAAGGAGATGACGAATATGCAACAAGGAGTTAAGAAAAGGTGCTTAAGACGAACCCAAACCGGACCGTGGTAG 1476 0.4763 MNESCTARILRWKKVGADWVEITSLTTKDIRHLAPLPIHPPSPIQFLSFSSPNLELILRFYRTGSKMNFGNDHGGGNSGGGRPPANYLLARQPSVYSLTFDEFVNTMGGSGKDFGSMNMDELLKNIWSAEEVQTMASLSGVQQGGSASGGHLQRQGSLTLPRTLSQKTVDEVWKDISKDYGAAGKDAPNVPQRQQTLGEMTLEEFLVRAGVVREDAQAQLIGKPNGGDFPDLSRTGNNNVIGLSFQQMNMGTGLMANQITGNNDQLSLQSRTNLPLNVNGARSNQQQLPNSKSTQPQIFPKQPAMPYAGQIPLTNNTQLGNQGMRGGMAGIVDQGLNGNLVQSSALQSGGMGMVGLGPGAVRVAKGSPANQLSCDEMGKSNDDTSSVSPLPYAFNGGLRGRKSSGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEEEVAKLKEENEELRRKQAEIMEMQENQVKEMTNMQQGVKKRCLRRTQTGPW 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0887 491 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 89 491 IPR043452 GO:0003700|GO:0045893
Lele25g0887 491 Pfam bZIP transcription factor 413 466 IPR004827 GO:0003700|GO:0006355
Lele25g0887 491 CDD bZIP_plant_BZIP46 413 464 - -
Lele25g0887 491 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 411 468 - -
Lele25g0887 491 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 411 462 IPR004827 GO:0003700|GO:0006355
Lele25g0887 491 SMART brlzneu 409 473 IPR004827 GO:0003700|GO:0006355
Lele25g0887 491 Gene3D - 411 482 - -
Lele25g0887 491 Coils Coil 429 466 - -
Lele25g0887 491 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 416 431 IPR004827 GO:0003700|GO:0006355
Lele25g0887 491 MobiDBLite consensus disorder prediction 470 491 - -
Lele25g0887 491 SUPERFAMILY Leucine zipper domain 413 462 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0887 Lele-ChrLele25 5677317 5681464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0887 64 491 bZIP Transcription Factor Family AT4G34000 43.724 2.03e-95 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele25g0887 bZIP_1 2.9e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0887 25 5677317 5681464 Lele27g1194 27 19005723 19010961 hybridization
Lele25g0887 25 5677317 5681464 Lele28g0878 28 5672469 5675664 hybridization